The 2.0 version of rSNPBase

Variant report

Variant rs11818885
Chromosome Location chr10:6184232-6184233
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:6176600-6185000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr10:6182000-6184400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
3 chr10:6182000-6185400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr10:6182600-6185000 Enhancers Placenta Amnion Placenta Amnion
5 chr10:6182800-6186200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr10:6183000-6184400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
7 chr10:6183000-6185000 Weak transcription Primary B cells from cord blood blood
8 chr10:6183000-6185200 Weak transcription Pancreas Pancrea
9 chr10:6183000-6185400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr10:6183000-6185800 Weak transcription Primary T cells from cord blood blood
11 chr10:6183000-6186000 Weak transcription Primary hematopoietic stem cells blood
12 chr10:6183000-6186200 Weak transcription Brain Angular Gyrus brain
13 chr10:6183000-6186200 Weak transcription HUVEC blood vessel
14 chr10:6183200-6185600 Enhancers Primary neutrophils fromperipheralblood blood
15 chr10:6183200-6185600 Weak transcription Fetal Thymus thymus
16 chr10:6183200-6185600 Weak transcription Dnd41 blood
17 chr10:6183200-6185800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr10:6183400-6185000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr10:6183600-6184400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:6183600-6184400 Enhancers Primary Natural Killer cells fromperipheralblood blood
21 chr10:6183600-6184400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr10:6183600-6185000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr10:6183600-6185200 Weak transcription Spleen Spleen
24 chr10:6183600-6185800 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr10:6183600-6186000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr10:6183600-6186200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr10:6183600-6186200 Weak transcription Rectal Smooth Muscle rectum
28 chr10:6183800-6184400 Bivalent Enhancer Fetal Muscle Leg muscle
29 chr10:6183800-6185200 Weak transcription Primary monocytes fromperipheralblood blood
30 chr10:6183800-6185800 Weak transcription Ovary ovary
31 chr10:6183800-6186200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr10:6183800-6186200 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr10:6183800-6186200 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr10:6183800-6186200 Weak transcription Right Atrium heart
35 chr10:6183800-6186400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr10:6183800-6186400 Weak transcription Esophagus oesophagus
37 chr10:6183800-6186400 Weak transcription HMEC breast
38 chr10:6184000-6184400 Enhancers Liver Liver
39 chr10:6184000-6184400 Enhancers Duodenum Mucosa Duodenum
40 chr10:6184000-6184600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr10:6184000-6184600 Enhancers Primary B cells from peripheral blood blood
42 chr10:6184000-6184600 Bivalent Enhancer Primary T cells fromperipheralblood blood
43 chr10:6184000-6184600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr10:6184000-6184600 Enhancers Primary T regulatory cells fromperipheralblood blood
45 chr10:6184000-6184800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr10:6184000-6185000 Bivalent Enhancer Fetal Muscle Trunk muscle
47 chr10:6184000-6185200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr10:6184000-6185200 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr10:6184000-6185200 Enhancers NH-A brain
50 chr10:6184000-6185200 Enhancers Osteobl bone

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Last update: Aug 31, 2015