The 2.0 version of rSNPBase

Variant report

Variant rs12722486
Chromosome Location chr10:6103762-6103763
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:6093800-6104200 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
2 chr10:6096200-6107400 Weak transcription Placenta Placenta
3 chr10:6096400-6103800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr10:6098000-6104400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
5 chr10:6099000-6103800 Weak transcription Spleen Spleen
6 chr10:6099000-6104000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr10:6099800-6104000 Weak transcription Lung lung
8 chr10:6100000-6103800 Weak transcription Left Ventricle heart
9 chr10:6101600-6103800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr10:6101800-6104800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr10:6102000-6104800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
12 chr10:6102000-6105200 Enhancers Primary hematopoietic stem cells blood
13 chr10:6102200-6104200 Active TSS Colonic Mucosa Colon
14 chr10:6102200-6104600 Active TSS Primary T regulatory cells fromperipheralblood blood
15 chr10:6102200-6104600 Active TSS Rectal Mucosa Donor 29 rectum
16 chr10:6102200-6105000 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr10:6102200-6107400 Weak transcription Right Atrium heart
18 chr10:6102200-6107400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr10:6102400-6104600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
20 chr10:6102800-6104400 Flanking Active TSS Primary B cells from peripheral blood blood
21 chr10:6102800-6104400 Active TSS Adipose Nuclei Adipose
22 chr10:6103000-6103800 Weak transcription Primary monocytes fromperipheralblood blood
23 chr10:6103000-6103800 Enhancers Thymus Thymus
24 chr10:6103200-6104800 Flanking Active TSS Primary T cells from cord blood blood
25 chr10:6103400-6103800 Active TSS Primary T cells fromperipheralblood blood
26 chr10:6103400-6103800 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr10:6103400-6104400 Active TSS Duodenum Mucosa Duodenum
28 chr10:6103400-6104800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
29 chr10:6103400-6105000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
30 chr10:6103600-6103800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
31 chr10:6103600-6104000 Active TSS Duodenum Smooth Muscle Duodenum
32 chr10:6103600-6104200 Active TSS Rectal Smooth Muscle rectum
33 chr10:6103600-6104400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
34 chr10:6103600-6104400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
35 chr10:6103600-6104600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
36 chr10:6103600-6104800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
37 chr10:6103600-6104800 Flanking Active TSS GM12878-XiMat blood
38 chr10:6103600-6105000 Enhancers Primary B cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015