The 2.0 version of rSNPBase

Variant report

Variant rs11831555
Chromosome Location chr12:12547381-12547382
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12511600-12550600 Weak transcription Rectal Smooth Muscle rectum
2 chr12:12519200-12549800 Weak transcription Aorta Aorta
3 chr12:12521800-12556200 Weak transcription Primary hematopoietic stem cells blood
4 chr12:12525400-12550200 Weak transcription Fetal Stomach stomach
5 chr12:12526400-12558800 Weak transcription Stomach Smooth Muscle stomach
6 chr12:12532800-12556400 Weak transcription Spleen Spleen
7 chr12:12533400-12555800 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr12:12533600-12555400 Weak transcription Primary monocytes fromperipheralblood blood
9 chr12:12535400-12561400 Weak transcription Primary B cells from peripheral blood blood
10 chr12:12537200-12576000 Weak transcription Primary B cells from cord blood blood
11 chr12:12538200-12551000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr12:12538400-12548600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr12:12538400-12549200 Weak transcription Fetal Muscle Leg muscle
14 chr12:12538400-12550200 Weak transcription Primary T cells from cord blood blood
15 chr12:12538400-12551600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr12:12538400-12552800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr12:12538400-12555400 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr12:12538400-12556200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr12:12538600-12561800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr12:12538800-12551400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr12:12540200-12560600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr12:12540600-12549400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr12:12540600-12556200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr12:12540800-12550800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr12:12540800-12551000 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr12:12540800-12553800 Weak transcription GM12878-XiMat blood
27 chr12:12540800-12555400 Weak transcription Duodenum Mucosa Duodenum
28 chr12:12541000-12550000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr12:12541000-12550200 Weak transcription Hela-S3 cervix
30 chr12:12541000-12550600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr12:12541000-12551000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr12:12541000-12551000 Weak transcription Small Intestine intestine
33 chr12:12541200-12549200 Weak transcription NHLF lung
34 chr12:12541400-12549200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr12:12541400-12550000 Weak transcription NHDF-Ad bronchial
36 chr12:12541400-12550800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr12:12541400-12552600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr12:12541400-12562800 Weak transcription Psoas Muscle Psoas
39 chr12:12541600-12547600 Weak transcription Brain Substantia Nigra brain
40 chr12:12541800-12548600 Weak transcription Brain Anterior Caudate brain
41 chr12:12541800-12549200 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr12:12541800-12549200 Weak transcription Brain Cingulate Gyrus brain
43 chr12:12541800-12549800 Weak transcription HSMMtube muscle
44 chr12:12541800-12557200 Weak transcription Primary T cells fromperipheralblood blood
45 chr12:12542000-12548800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr12:12542000-12549200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr12:12542800-12551600 Weak transcription Lung lung
48 chr12:12543000-12558800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr12:12545600-12549800 Weak transcription Fetal Kidney kidney
50 chr12:12545600-12550200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015