The 2.0 version of rSNPBase

Variant report

Variant rs58529509
Chromosome Location chr12:12618204-12618205
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12595200-12618600 Weak transcription Primary hematopoietic stem cells blood
2 chr12:12596000-12620200 Weak transcription HSMM muscle
3 chr12:12596000-12629800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr12:12596200-12620600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr12:12597400-12629000 Weak transcription Rectal Smooth Muscle rectum
6 chr12:12599000-12618600 Weak transcription Left Ventricle heart
7 chr12:12601000-12620200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr12:12603200-12618400 Weak transcription Esophagus oesophagus
9 chr12:12603400-12618600 Weak transcription Pancreas Pancrea
10 chr12:12603800-12639200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr12:12604000-12628600 Weak transcription Fetal Lung lung
12 chr12:12604600-12618600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr12:12605200-12618400 Weak transcription Liver Liver
14 chr12:12607800-12629400 Weak transcription Fetal Kidney kidney
15 chr12:12608400-12627200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr12:12608400-12629600 Weak transcription Colon Smooth Muscle Colon
17 chr12:12609000-12623400 Weak transcription A549 lung
18 chr12:12609200-12626800 Weak transcription Fetal Muscle Trunk muscle
19 chr12:12609800-12628400 Weak transcription NHLF lung
20 chr12:12610200-12618600 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr12:12610200-12620200 Weak transcription Osteobl bone
22 chr12:12610400-12618400 Weak transcription Duodenum Mucosa Duodenum
23 chr12:12610800-12622000 Weak transcription NHEK skin
24 chr12:12610800-12623000 Weak transcription H1 Cell Line embryonic stem cell
25 chr12:12610800-12623200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr12:12610800-12658000 Weak transcription NHDF-Ad bronchial
27 chr12:12611000-12618400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr12:12611000-12618600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr12:12611000-12619400 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr12:12611000-12621600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr12:12611000-12627800 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr12:12611000-12628600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr12:12611200-12620200 Weak transcription Brain Cingulate Gyrus brain
34 chr12:12611200-12622000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr12:12611200-12627400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr12:12611200-12629000 Weak transcription Hela-S3 cervix
37 chr12:12611400-12618400 Weak transcription Brain Anterior Caudate brain
38 chr12:12611400-12619200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr12:12611400-12619200 Weak transcription Adipose Nuclei Adipose
40 chr12:12611400-12620200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr12:12611400-12620200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr12:12611400-12620200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr12:12611400-12620200 Weak transcription HSMMtube muscle
44 chr12:12613200-12620800 Weak transcription Brain Germinal Matrix brain
45 chr12:12613400-12620200 Weak transcription Brain Angular Gyrus brain
46 chr12:12613400-12625200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
47 chr12:12613400-12627400 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr12:12613600-12618400 Weak transcription Colonic Mucosa Colon
49 chr12:12613800-12620600 Enhancers Fetal Thymus thymus
50 chr12:12614400-12620200 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015