The 2.0 version of rSNPBase

Variant report

Variant rs7973069
Chromosome Location chr12:12597882-12597883
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12582600-12599400 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr12:12584000-12598600 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr12:12587400-12600200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr12:12587400-12600200 Weak transcription Ovary ovary
5 chr12:12588600-12599400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr12:12589800-12607200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr12:12590000-12599400 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr12:12590400-12599200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr12:12590400-12601800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr12:12590600-12599600 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr12:12590600-12614600 Weak transcription Primary B cells from cord blood blood
12 chr12:12590800-12599600 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr12:12592000-12598400 Enhancers Primary T helper cells fromperipheralblood blood
14 chr12:12592200-12600400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr12:12592200-12602200 Enhancers Fetal Thymus thymus
16 chr12:12592600-12598200 Enhancers Stomach Mucosa stomach
17 chr12:12592800-12598200 Enhancers Fetal Lung lung
18 chr12:12594000-12599200 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr12:12594400-12600200 Weak transcription Lung lung
20 chr12:12594400-12618200 Weak transcription Primary B cells from peripheral blood blood
21 chr12:12594800-12600400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr12:12595000-12602200 Weak transcription Placenta Placenta
23 chr12:12595200-12599000 Enhancers Primary T cells fromperipheralblood blood
24 chr12:12595200-12599200 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr12:12595200-12600200 Weak transcription Fetal Intestine Large intestine
26 chr12:12595200-12602800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr12:12595200-12609200 Weak transcription GM12878-XiMat blood
28 chr12:12595200-12618600 Weak transcription Primary hematopoietic stem cells blood
29 chr12:12595800-12600200 Weak transcription Fetal Intestine Small intestine
30 chr12:12596000-12599200 Enhancers Primary T helper cells PMA-I stimulated --
31 chr12:12596000-12602200 Weak transcription A549 lung
32 chr12:12596000-12620200 Weak transcription HSMM muscle
33 chr12:12596000-12629800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr12:12596200-12598600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr12:12596200-12600000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr12:12596200-12620600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr12:12596400-12600600 Weak transcription Hela-S3 cervix
38 chr12:12596400-12603200 Weak transcription Aorta Aorta
39 chr12:12596600-12601000 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr12:12596800-12598000 Enhancers Colon Smooth Muscle Colon
41 chr12:12596800-12598200 Weak transcription NHEK skin
42 chr12:12596800-12598600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr12:12596800-12598600 Weak transcription HMEC breast
44 chr12:12596800-12598800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr12:12596800-12602000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr12:12596800-12602400 Weak transcription Duodenum Mucosa Duodenum
47 chr12:12596800-12603000 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr12:12596800-12604600 Weak transcription NHLF lung
49 chr12:12596800-12618200 Weak transcription Primary T cells from cord blood blood
50 chr12:12596800-12618200 Weak transcription Duodenum Smooth Muscle Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015