The 2.0 version of rSNPBase

Variant report

Variant rs4763828
Chromosome Location chr12:12587661-12587662
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12572600-12588400 Weak transcription Primary T cells from cord blood blood
2 chr12:12578200-12588600 Weak transcription Primary B cells from cord blood blood
3 chr12:12578400-12588200 Weak transcription Primary B cells from peripheral blood blood
4 chr12:12578800-12589200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr12:12580000-12588600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr12:12581600-12588800 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr12:12582000-12589200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr12:12582600-12592000 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr12:12582600-12595000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr12:12582600-12599400 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr12:12582800-12592600 Weak transcription NH-A brain
12 chr12:12582800-12596400 Weak transcription Spleen Spleen
13 chr12:12583000-12588600 Weak transcription GM12878-XiMat blood
14 chr12:12583000-12589400 Weak transcription HSMM muscle
15 chr12:12583000-12594000 Weak transcription HSMMtube muscle
16 chr12:12583600-12588000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr12:12584000-12588000 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr12:12584000-12598600 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr12:12584200-12588200 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr12:12584200-12588600 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr12:12584200-12588600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr12:12584200-12589200 Enhancers Fetal Lung lung
23 chr12:12584200-12590200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr12:12584200-12592200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr12:12584200-12592800 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr12:12584200-12593200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr12:12584400-12592000 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr12:12584800-12588400 Enhancers Brain Substantia Nigra brain
29 chr12:12585200-12588400 Enhancers HepG2 liver
30 chr12:12585400-12588400 Weak transcription Primary hematopoietic stem cells blood
31 chr12:12585400-12588400 Enhancers Brain Inferior Temporal Lobe brain
32 chr12:12585400-12593200 Weak transcription Small Intestine intestine
33 chr12:12585600-12589200 Weak transcription Duodenum Mucosa Duodenum
34 chr12:12585600-12590200 Weak transcription HMEC breast
35 chr12:12585600-12592000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr12:12585600-12592000 Weak transcription HUVEC blood vessel
37 chr12:12585600-12595200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr12:12585800-12595400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr12:12586000-12589200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr12:12586000-12589200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr12:12586000-12589400 Weak transcription Muscle Satellite Cultured Cells --
42 chr12:12586000-12593200 Weak transcription Liver Liver
43 chr12:12586000-12594200 Weak transcription Hela-S3 cervix
44 chr12:12586000-12595000 Weak transcription Adipose Nuclei Adipose
45 chr12:12586200-12588000 Enhancers Brain Hippocampus Middle brain
46 chr12:12586200-12589200 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr12:12586200-12595000 Weak transcription Colon Smooth Muscle Colon
48 chr12:12586200-12595400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr12:12586400-12588800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr12:12586600-12588000 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015