The 2.0 version of rSNPBase

Variant report

Variant rs11841968
Chromosome Location chr13:79886499-79886500
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:79865000-79893200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr13:79881800-79892800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr13:79882000-79894000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr13:79882200-79890600 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr13:79882200-79891800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr13:79882200-79892800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr13:79882200-79893600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr13:79882200-79894400 Weak transcription H1 Cell Line embryonic stem cell
9 chr13:79882200-79894400 Weak transcription Brain Angular Gyrus brain
10 chr13:79882200-79895600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr13:79882200-79899200 Weak transcription Fetal Muscle Trunk muscle
12 chr13:79882200-79907400 Weak transcription Fetal Muscle Leg muscle
13 chr13:79882200-79907600 Weak transcription Brain Anterior Caudate brain
14 chr13:79882200-79909800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr13:79882400-79888400 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr13:79882400-79890800 Weak transcription HMEC breast
17 chr13:79882400-79891200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr13:79882400-79891800 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr13:79882400-79891800 Weak transcription Adipose Nuclei Adipose
20 chr13:79882400-79892000 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr13:79882400-79892800 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr13:79882400-79893200 Weak transcription HepG2 liver
23 chr13:79882400-79894400 Weak transcription Stomach Smooth Muscle stomach
24 chr13:79882400-79894400 Weak transcription Osteobl bone
25 chr13:79882400-79904400 Weak transcription Brain Cingulate Gyrus brain
26 chr13:79882400-79905000 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr13:79882400-79911200 Weak transcription Left Ventricle heart
28 chr13:79882400-79911200 Weak transcription Ovary ovary
29 chr13:79882400-79914400 Weak transcription Rectal Smooth Muscle rectum
30 chr13:79882400-79925000 Weak transcription HSMMtube muscle
31 chr13:79882600-79891200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr13:79882600-79894400 Weak transcription Muscle Satellite Cultured Cells --
33 chr13:79882800-79887600 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr13:79883600-79888200 Weak transcription Dnd41 blood
35 chr13:79883800-79888600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr13:79883800-79891600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr13:79884000-79899400 Weak transcription Psoas Muscle Psoas
38 chr13:79884000-79905200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr13:79884200-79892800 Weak transcription Primary hematopoietic stem cells blood
40 chr13:79884400-79909000 Weak transcription Brain Hippocampus Middle brain
41 chr13:79884800-79888000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr13:79884800-79888200 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr13:79884800-79893600 Weak transcription NH-A brain
44 chr13:79884800-79895600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr13:79885000-79888400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr13:79885000-79889600 Weak transcription NHDF-Ad bronchial
47 chr13:79885000-79891800 Weak transcription Fetal Intestine Large intestine
48 chr13:79885000-79892200 Weak transcription Fetal Thymus thymus
49 chr13:79885400-79887200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr13:79885400-79887400 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015