Variant report

Variant	rs11838897
Chromosome Location	chr13:79873302-79873303
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs1018633	0.85[GIH][hapmap];1.00[TSI][hapmap]
rs11838700	1.00[EUR][1000 genomes]
rs11839689	1.00[EUR][1000 genomes]
rs11840407	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11841482	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11841968	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11843203	1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11843917	1.00[EUR][1000 genomes]
rs11843939	1.00[EUR][1000 genomes]
rs1410334	1.00[ASN][1000 genomes]
rs1410335	1.00[ASN][1000 genomes]
rs17071316	1.00[ASN][1000 genomes]
rs17071492	1.00[EUR][1000 genomes]
rs35724140	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41305026	1.00[ASN][1000 genomes]
rs41364649	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];1.00[ASN][1000 genomes]
rs55820419	1.00[EUR][1000 genomes]
rs56863569	1.00[EUR][1000 genomes]
rs58043862	1.00[ASN][1000 genomes]
rs58233612	1.00[EUR][1000 genomes]
rs59251364	1.00[EUR][1000 genomes]
rs60016606	1.00[EUR][1000 genomes]
rs6563111	1.00[CEU][hapmap];0.85[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7337908	1.00[CEU][hapmap];0.85[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7338662	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs73548905	1.00[EUR][1000 genomes]
rs73548913	1.00[EUR][1000 genomes]
rs73548931	1.00[EUR][1000 genomes]
rs73548932	1.00[EUR][1000 genomes]
rs73548936	1.00[EUR][1000 genomes]
rs73548939	1.00[EUR][1000 genomes]
rs73548952	1.00[EUR][1000 genomes]
rs73548962	1.00[EUR][1000 genomes]
rs73548974	1.00[EUR][1000 genomes]
rs73551514	1.00[EUR][1000 genomes]
rs73551516	1.00[EUR][1000 genomes]
rs73560567	1.00[ASN][1000 genomes]
rs74098308	1.00[EUR][1000 genomes]
rs74098315	1.00[EUR][1000 genomes]
rs74098399	1.00[EUR][1000 genomes]
rs7985239	1.00[EUR][1000 genomes]
rs7994370	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7995350	1.00[EUR][1000 genomes]
rs7995408	1.00[EUR][1000 genomes]
rs7996153	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8002638	1.00[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79865000-79893200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links