Variant report

Variant	rs11892702
Chromosome Location	chr2:67073325-67073326
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1420366	1.00[YRI][hapmap]
rs17032622	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17032630	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17032637	0.81[AFR][1000 genomes]
rs17032645	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17032655	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73935992	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73937609	1.00[AMR][1000 genomes]
rs7588930	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009027	chr2:66947462-67114455	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv874246	chr2:67001969-67147854	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67068400-67073600	Weak transcription	Fetal Kidney	kidney
2	chr2:67068400-67080200	Weak transcription	Ovary	ovary
3	chr2:67068600-67077800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr2:67069000-67081400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr2:67072400-67077000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr2:67072800-67073800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr2:67072800-67076200	Weak transcription	NHLF	lung
8	chr2:67072800-67078000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr2:67072800-67079200	Enhancers	Pancreas	Pancrea
10	chr2:67073000-67073800	Weak transcription	Fetal Lung	lung
11	chr2:67073000-67073800	Weak transcription	HSMM	muscle
12	chr2:67073000-67074800	Enhancers	Fetal Intestine Large	intestine
13	chr2:67073000-67076200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr2:67073000-67076200	Weak transcription	Aorta	Aorta
15	chr2:67073000-67078000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr2:67073200-67076200	Weak transcription	Fetal Stomach	stomach
17	chr2:67073200-67077800	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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