Variant report

Variant	rs11935137
Chromosome Location	chr14:32706185-32706186
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10005429	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10010288	0.89[AFR][1000 genomes]
rs10012156	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10018103	1.00[AMR][1000 genomes]
rs10018738	1.00[AMR][1000 genomes]
rs10020503	1.00[AMR][1000 genomes]
rs10020664	1.00[AMR][1000 genomes]
rs10020702	1.00[AMR][1000 genomes]
rs10025937	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10027349	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10034045	1.00[AMR][1000 genomes]
rs10034305	1.00[AMR][1000 genomes]
rs11930592	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11930725	0.83[AFR][1000 genomes]
rs11933364	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11934251	0.86[AFR][1000 genomes]
rs11939318	0.86[AFR][1000 genomes]
rs11945977	0.86[AFR][1000 genomes]
rs11947628	1.00[AMR][1000 genomes]
rs13434502	1.00[AMR][1000 genomes]
rs1552664	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17011392	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17011543	0.88[AFR][1000 genomes]
rs17011549	0.88[AFR][1000 genomes]
rs17011608	0.86[AFR][1000 genomes]
rs28386846	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28416472	0.93[AFR][1000 genomes]
rs28439505	1.00[AMR][1000 genomes]
rs28499063	1.00[AMR][1000 genomes]
rs28531370	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28578629	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28592768	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28605129	0.98[AFR][1000 genomes]
rs28625618	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28670367	1.00[AMR][1000 genomes]
rs28671296	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28697890	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28721403	0.96[AFR][1000 genomes]
rs28817587	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28890552	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6826241	0.86[AFR][1000 genomes]
rs6831800	0.86[AFR][1000 genomes]
rs6850749	0.83[AFR][1000 genomes]
rs6852317	0.86[AFR][1000 genomes]
rs7653964	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7673481	0.88[AFR][1000 genomes]
rs7677436	0.88[AFR][1000 genomes]
rs7681644	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7682055	0.86[AFR][1000 genomes]
rs7691426	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9884514	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9995510	0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv3527777	chr14:32669175-32761850	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3527778	chr14:32669175-32761850	Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv564184	chr14:32688214-32734691	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32701200-32713600	Weak transcription	Left Ventricle	heart

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