Variant report

Variant	rs11960770
Chromosome Location	chr5:94428936-94428937
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1426099	1.00[JPT][hapmap]
rs17084403	0.93[CEU][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs66995620	0.87[EUR][1000 genomes]
rs72779406	0.85[ASN][1000 genomes]
rs72779407	0.82[ASN][1000 genomes]
rs72779408	0.85[ASN][1000 genomes]
rs72779410	0.82[ASN][1000 genomes]
rs72779424	0.85[ASN][1000 genomes]
rs72779429	0.93[ASN][1000 genomes]
rs72779434	1.00[ASN][1000 genomes]
rs72779435	1.00[ASN][1000 genomes]
rs72779437	0.89[ASN][1000 genomes]
rs890294	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94427600-94429000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr5:94428600-94429600	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr5:94428800-94429400	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr5:94428800-94429600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr5:94428800-94429600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr5:94428800-94429800	Enhancers	H1 Cell Line	embryonic stem cell
7	chr5:94428800-94429800	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr5:94428800-94429800	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr5:94428800-94429800	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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