Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:182819036..182820920-chr2:182951975..182953490,2	MCF-7	breast:
2	chr2:182753988..182769660-chr2:182938612..182954194,58	MCF-7	breast:
3	chr2:182754771..182758189-chr2:182950472..182955513,4	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10930985	0.90[EUR][1000 genomes]
rs10930986	0.87[EUR][1000 genomes]
rs10930987	0.88[EUR][1000 genomes]
rs1196146	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1196147	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs1196148	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs1196151	1.00[CEU][hapmap];0.98[GIH][hapmap];0.85[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1196154	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1196172	0.84[CEU][hapmap];0.81[JPT][hapmap]
rs1196174	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13395058	0.88[EUR][1000 genomes]
rs1921148	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs1963270	0.85[EUR][1000 genomes]
rs4404233	0.96[CEU][hapmap];0.81[TSI][hapmap];0.83[EUR][1000 genomes]
rs6710397	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs6747009	0.94[EUR][1000 genomes]
rs7561331	0.96[CEU][hapmap];0.84[CHD][hapmap];0.89[TSI][hapmap];0.87[EUR][1000 genomes]
rs7579701	0.86[EUR][1000 genomes]
rs7603587	0.96[CEU][hapmap];0.84[CHD][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs987787	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875477	chr2:182938377-183086478	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182950400-182953200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr2:182950600-182954600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr2:182952400-182953800	Enhancers	Fetal Stomach	stomach
4	chr2:182952400-182954400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:182952800-182953600	Weak transcription	Fetal Kidney	kidney
6	chr2:182952800-182955200	Enhancers	Fetal Lung	lung
7	chr2:182952800-182955200	Enhancers	HSMMtube	muscle

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