Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr2:182953457-182953657	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:182753988..182769660-chr2:182938612..182954194,58	MCF-7	breast:
2	chr2:182754771..182758189-chr2:182950472..182955513,4	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10930985	0.91[EUR][1000 genomes]
rs10930986	0.87[EUR][1000 genomes]
rs10930987	0.87[EUR][1000 genomes]
rs1196146	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1196147	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs1196148	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs1196149	1.00[CEU][hapmap];0.98[GIH][hapmap];0.85[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1196154	1.00[CEU][hapmap];0.85[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1196172	0.83[CEU][hapmap]
rs1196174	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13395058	0.88[EUR][1000 genomes]
rs1921148	0.95[CEU][hapmap];0.88[EUR][1000 genomes]
rs1963270	0.84[EUR][1000 genomes]
rs4404233	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs6710397	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs6747009	0.95[EUR][1000 genomes]
rs7561331	0.96[CEU][hapmap];0.82[TSI][hapmap];0.87[EUR][1000 genomes]
rs7579701	0.85[EUR][1000 genomes]
rs7603587	0.96[CEU][hapmap];0.82[TSI][hapmap];0.88[EUR][1000 genomes]
rs987787	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875477	chr2:182938377-183086478	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182950600-182954600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr2:182952400-182953800	Enhancers	Fetal Stomach	stomach
3	chr2:182952400-182954400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr2:182952800-182953600	Weak transcription	Fetal Kidney	kidney
5	chr2:182952800-182955200	Enhancers	Fetal Lung	lung
6	chr2:182952800-182955200	Enhancers	HSMMtube	muscle
7	chr2:182953200-182954000	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr2:182953200-182954000	Enhancers	NHLF	lung
9	chr2:182953200-182954200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr2:182953200-182954200	Enhancers	Duodenum Smooth Muscle	Duodenum
11	chr2:182953200-182954200	Enhancers	Ovary	ovary
12	chr2:182953400-182953600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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