Variant report

Variant	rs11970363
Chromosome Location	chr6:70470516-70470517
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:70465560..70467112-chr6:70469091..70470873,2	MCF-7	breast:
2	chr6:70467419..70470770-chr6:70504221..70506205,3	K562	blood:
3	chr6:70465920..70468544-chr6:70470471..70472338,2	MCF-7	breast:

Extended variants
information (count: 218 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:216)

rs_ID	r²[population]
rs1026441	0.87[EUR][1000 genomes]
rs1031629	0.94[JPT][hapmap]
rs1031631	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.83[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1078026	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10945188	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12055543	0.82[AFR][1000 genomes]
rs12173563	0.81[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12175229	0.88[EUR][1000 genomes]
rs12525951	0.80[CEU][hapmap];0.90[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12661224	0.80[CEU][hapmap];0.81[CHB][hapmap];0.95[JPT][hapmap];0.92[EUR][1000 genomes]
rs12662657	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12665798	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1457492	0.95[JPT][hapmap];0.90[EUR][1000 genomes]
rs1457493	0.88[EUR][1000 genomes]
rs1457494	0.85[CEU][hapmap];0.95[JPT][hapmap];0.88[EUR][1000 genomes]
rs1457499	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1457500	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1542412	0.87[EUR][1000 genomes]
rs1563606	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1563607	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1563608	0.84[YRI][hapmap];0.86[AFR][1000 genomes]
rs1563609	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16868145	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1902650	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1902654	0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1902655	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1902656	0.91[EUR][1000 genomes]
rs1963956	0.87[EUR][1000 genomes]
rs1993481	0.81[CEU][hapmap];0.95[JPT][hapmap];0.91[EUR][1000 genomes]
rs1993482	0.84[AFR][1000 genomes]
rs1993483	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2045444	0.95[JPT][hapmap];0.87[EUR][1000 genomes]
rs2061310	0.94[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];0.92[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2125022	0.87[EUR][1000 genomes]
rs2125023	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2125024	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2168712	0.91[AFR][1000 genomes]
rs2168713	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2290710	0.92[EUR][1000 genomes]
rs2305837	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs2305838	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2305839	0.82[CEU][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2345564	0.81[AFR][1000 genomes]
rs2445957	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2445958	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2445959	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2445960	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2445962	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2445973	0.89[AFR][1000 genomes]
rs2445976	0.84[YRI][hapmap];0.88[AFR][1000 genomes]
rs2502597	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2881080	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3214021	0.87[EUR][1000 genomes]
rs3752787	0.82[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3752789	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3752790	0.82[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3778242	0.82[CEU][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3799100	0.80[CHB][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes]
rs3799104	0.95[JPT][hapmap];0.89[EUR][1000 genomes]
rs3799105	0.81[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes]
rs3799106	0.91[EUR][1000 genomes]
rs3799112	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.92[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3799113	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3799117	0.82[CEU][hapmap];0.95[JPT][hapmap];0.92[EUR][1000 genomes]
rs3799119	0.82[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3799120	0.82[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3806960	0.82[LWK][hapmap]
rs3816563	0.87[EUR][1000 genomes]
rs3823078	0.95[JPT][hapmap];0.88[EUR][1000 genomes]
rs3823079	0.86[EUR][1000 genomes]
rs3947930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4304126	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes]
rs4348273	0.81[CEU][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4365888	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4418153	0.92[EUR][1000 genomes]
rs4473825	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4516910	0.95[JPT][hapmap];0.89[EUR][1000 genomes]
rs4533950	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs45559535	0.92[EUR][1000 genomes]
rs4624831	0.85[CEU][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4706271	0.95[JPT][hapmap];0.95[TSI][hapmap];0.88[EUR][1000 genomes]
rs4706272	0.95[JPT][hapmap];0.87[EUR][1000 genomes]
rs4706273	0.88[CEU][hapmap];0.95[JPT][hapmap];0.88[EUR][1000 genomes]
rs4706274	0.82[JPT][hapmap]
rs4706283	0.91[EUR][1000 genomes]
rs4706296	0.92[EUR][1000 genomes]
rs4707278	0.87[EUR][1000 genomes]
rs4707289	0.95[JPT][hapmap];0.88[EUR][1000 genomes]
rs4707343	0.82[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes]
rs4707359	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4707384	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4707387	0.92[EUR][1000 genomes]
rs4707390	0.80[AMR][1000 genomes]
rs4707392	0.92[EUR][1000 genomes]
rs5027848	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57913618	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59459704	0.92[EUR][1000 genomes]
rs59510607	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs59738216	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62407462	0.91[EUR][1000 genomes]
rs62407463	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62408999	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6455337	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6455338	0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.87[EUR][1000 genomes]
rs6455339	0.95[JPT][hapmap];0.87[EUR][1000 genomes]
rs6455340	0.87[AFR][1000 genomes]
rs6455342	0.82[AFR][1000 genomes]
rs67438720	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs67678871	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs68181489	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6902295	0.95[JPT][hapmap];0.90[EUR][1000 genomes]
rs6904680	0.81[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes]
rs6905645	0.87[ASW][hapmap];0.93[LWK][hapmap];0.92[MKK][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes]
rs6908871	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6909708	0.92[EUR][1000 genomes]
rs6918407	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6919766	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6920280	0.95[JPT][hapmap];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6920725	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6931124	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6935994	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6938478	0.80[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes]
rs72910810	0.92[EUR][1000 genomes]
rs7738792	0.81[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7739633	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7741758	0.81[CHB][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs7742015	0.93[LWK][hapmap];0.92[MKK][hapmap];0.85[YRI][hapmap]
rs7742087	0.90[EUR][1000 genomes]
rs7743613	0.82[CEU][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7743876	0.90[EUR][1000 genomes]
rs7749324	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7752533	0.81[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7755173	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7755189	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7755920	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7758405	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7759966	0.91[EUR][1000 genomes]
rs7762400	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.92[EUR][1000 genomes]
rs7767789	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7771508	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7775172	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8180582	0.86[EUR][1000 genomes]
rs9185	0.93[LWK][hapmap];0.92[MKK][hapmap];0.85[YRI][hapmap]
rs921972	0.95[JPT][hapmap];0.89[EUR][1000 genomes]
rs921973	0.93[LWK][hapmap];0.92[MKK][hapmap];0.85[YRI][hapmap]
rs9294848	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9294851	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes]
rs9342766	0.81[YRI][hapmap]
rs9342767	0.81[CEU][hapmap];0.95[JPT][hapmap];0.92[EUR][1000 genomes]
rs9342769	0.82[CEU][hapmap];0.95[JPT][hapmap];0.82[EUR][1000 genomes]
rs9342770	0.92[EUR][1000 genomes]
rs9342772	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9342773	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs9342774	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9342777	0.82[CEU][hapmap];0.94[JPT][hapmap];0.92[EUR][1000 genomes]
rs9346327	0.86[EUR][1000 genomes]
rs9346328	0.86[EUR][1000 genomes]
rs9346332	0.91[EUR][1000 genomes]
rs9346333	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs9346335	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[EUR][1000 genomes]
rs9346336	0.91[EUR][1000 genomes]
rs9346337	0.92[EUR][1000 genomes]
rs9346338	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9346339	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9346340	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9346341	0.87[YRI][hapmap];0.84[AFR][1000 genomes]
rs9346342	0.81[YRI][hapmap];0.81[AFR][1000 genomes]
rs9346343	0.93[EUR][1000 genomes]
rs9346344	0.82[CEU][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9346348	0.81[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9346350	0.82[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9346351	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9346352	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9346353	0.81[CEU][hapmap];0.95[JPT][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9346354	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9346355	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9351772	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs9351774	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9351775	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9351776	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9354876	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9354877	0.86[EUR][1000 genomes]
rs9354879	0.95[JPT][hapmap];0.87[EUR][1000 genomes]
rs9354881	0.91[EUR][1000 genomes]
rs9354882	0.81[CEU][hapmap];0.95[JPT][hapmap];0.92[EUR][1000 genomes]
rs9354883	0.82[EUR][1000 genomes]
rs9354884	0.81[AFR][1000 genomes]
rs9354885	0.89[EUR][1000 genomes]
rs9354887	0.81[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9354888	0.81[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9354889	0.93[EUR][1000 genomes]
rs9354890	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9354891	0.80[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9354892	0.92[EUR][1000 genomes]
rs9354893	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9360397	0.95[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.87[EUR][1000 genomes]
rs9360399	0.91[EUR][1000 genomes]
rs9360400	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9360404	0.93[EUR][1000 genomes]
rs9360405	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9364046	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9364047	0.87[EUR][1000 genomes]
rs9364049	0.88[EUR][1000 genomes]
rs9364050	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9364051	0.90[EUR][1000 genomes]
rs9364053	0.92[EUR][1000 genomes]
rs9364054	0.95[JPT][hapmap];0.92[EUR][1000 genomes]
rs9364055	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9364056	0.81[CEU][hapmap];0.95[JPT][hapmap];0.92[EUR][1000 genomes]
rs9364057	0.81[CEU][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes]
rs9364058	0.82[CEU][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9364060	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9364061	0.91[CEU][hapmap];0.80[CHB][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9364063	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9364064	0.92[EUR][1000 genomes]
rs960144	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886140	chr6:70354682-70728202	Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv830682	chr6:70397851-70592883	Weak transcription Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11970363	LMBRD1	cis	cerebellum	SCAN

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70431400-70498600	Weak transcription	Ovary	ovary
2	chr6:70432000-70479800	Weak transcription	Pancreas	Pancrea
3	chr6:70432200-70480000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr6:70435800-70498800	Weak transcription	Adipose Nuclei	Adipose
5	chr6:70442400-70498200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr6:70442400-70498400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr6:70447800-70498400	Weak transcription	Placenta	Placenta
8	chr6:70448400-70470600	Weak transcription	Right Ventricle	heart
9	chr6:70448800-70489800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr6:70450600-70472000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr6:70450800-70487600	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr6:70453800-70505600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr6:70456400-70483000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr6:70456600-70471600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr6:70456600-70491000	Weak transcription	Stomach Smooth Muscle	stomach
16	chr6:70456800-70470600	Weak transcription	Left Ventricle	heart
17	chr6:70456800-70473400	Weak transcription	Aorta	Aorta
18	chr6:70457200-70486800	Weak transcription	Thymus	Thymus
19	chr6:70457200-70489800	Weak transcription	Esophagus	oesophagus
20	chr6:70457200-70494800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr6:70457400-70485000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr6:70457400-70489800	Weak transcription	Dnd41	blood
23	chr6:70457600-70473800	Weak transcription	Primary hematopoietic stem cells	blood
24	chr6:70457600-70484600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
25	chr6:70457600-70487400	Weak transcription	Rectal Mucosa Donor 29	rectum
26	chr6:70458200-70472400	Weak transcription	Fetal Thymus	thymus
27	chr6:70459400-70474000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
28	chr6:70459600-70477200	Weak transcription	Brain Cingulate Gyrus	brain
29	chr6:70461800-70480600	Weak transcription	Monocytes-CD14+_RO01746	blood
30	chr6:70463000-70492400	Weak transcription	Colon Smooth Muscle	Colon
31	chr6:70463800-70473800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
32	chr6:70463800-70479800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr6:70466200-70479800	Weak transcription	Fetal Stomach	stomach
34	chr6:70466400-70487000	Weak transcription	Primary monocytes fromperipheralblood	blood
35	chr6:70467000-70480000	Weak transcription	Primary T cells from cord blood	blood
36	chr6:70467200-70472400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr6:70467200-70473400	Weak transcription	Fetal Intestine Small	intestine
38	chr6:70467200-70481000	Weak transcription	Sigmoid Colon	Sigmoid Colon
39	chr6:70468400-70484800	Weak transcription	Brain Anterior Caudate	brain
40	chr6:70468400-70485200	Weak transcription	HSMMtube	muscle
41	chr6:70468800-70473200	Weak transcription	K562	blood
42	chr6:70468800-70478600	Weak transcription	Liver	Liver
43	chr6:70469000-70470600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
44	chr6:70469000-70479800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
45	chr6:70469000-70479800	Weak transcription	Small Intestine	intestine
46	chr6:70469000-70483000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
47	chr6:70469000-70483200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
48	chr6:70469000-70490600	Weak transcription	Duodenum Smooth Muscle	Duodenum
49	chr6:70469000-70492000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr6:70469200-70472600	Weak transcription	Primary T helper cells fromperipheralblood	blood

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