Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:103739982..103741550-chr7:103741677..103743723,3	K562	blood:
2	chr7:103736055..103737643-chr7:103740678..103742457,2	K562	blood:
3	chr7:103739982..103741550-chr7:103741677..103743723,2	K562	blood:
4	chr7:103740963..103742841-chr7:103761884..103763543,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10239281	0.83[TSI][hapmap]
rs10953404	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11982003	0.82[CEU][hapmap];1.00[YRI][hapmap];0.88[EUR][1000 genomes]
rs11984388	0.82[CEU][hapmap]
rs12705177	0.82[CEU][hapmap];0.85[TSI][hapmap]
rs17324209	0.82[CEU][hapmap];1.00[YRI][hapmap];0.88[EUR][1000 genomes]
rs194829	0.80[EUR][1000 genomes]
rs194836	0.82[CEU][hapmap];0.85[TSI][hapmap]
rs194839	0.80[EUR][1000 genomes]
rs194840	0.82[CEU][hapmap]
rs194842	0.82[CEU][hapmap];0.85[TSI][hapmap]
rs194850	0.82[CEU][hapmap]
rs194853	0.82[CEU][hapmap]
rs194854	0.82[CEU][hapmap]
rs194855	0.81[TSI][hapmap]
rs194862	0.80[CEU][hapmap]
rs2299407	0.82[CEU][hapmap]
rs2307405	0.86[EUR][1000 genomes]
rs3808011	0.82[CEU][hapmap]
rs3808012	0.81[CEU][hapmap]
rs3808013	0.82[CEU][hapmap];0.83[TSI][hapmap]
rs4729959	0.82[EUR][1000 genomes]
rs4729960	0.91[CEU][hapmap];0.83[EUR][1000 genomes]
rs55848	0.81[CEU][hapmap]
rs62485900	0.83[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs6944360	0.82[CEU][hapmap]
rs6952639	0.82[CEU][hapmap];0.85[TSI][hapmap]
rs6979022	0.82[CEU][hapmap]
rs6979695	0.82[CEU][hapmap]
rs9641322	0.86[CEU][hapmap];0.88[TSI][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs11978569	GPC2	cis	parietal	SCAN
rs11978569	C7orf47	cis	cerebellum	SCAN

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103740800-103741800	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr7:103740800-103741800	Enhancers	H9 Cell Line	embryonic stem cell
3	chr7:103740800-103741800	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr7:103741000-103741600	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr7:103741000-103741600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr7:103741000-103741800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
7	chr7:103741000-103741800	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr7:103741000-103742800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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