The 2.0 version of rSNPBase

Variant report

Variant rs1199290
Chromosome Location chr7:96794553-96794554
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:96760400-96796800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:96768800-96797800 Weak transcription Left Ventricle heart
3 chr7:96769000-96799600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr7:96769000-96811600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr7:96771400-96818200 Weak transcription A549 lung
6 chr7:96783600-96797000 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr7:96785600-96796800 Weak transcription HepG2 liver
8 chr7:96787000-96795600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr7:96787400-96797600 Weak transcription H9 Cell Line embryonic stem cell
10 chr7:96787600-96796200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr7:96787600-96796600 Weak transcription Esophagus oesophagus
12 chr7:96789400-96794800 Weak transcription Liver Liver
13 chr7:96789400-96812400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr7:96789400-96815400 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr7:96789400-96818000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr7:96789600-96797000 Weak transcription Aorta Aorta
17 chr7:96789600-96797200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr7:96789600-96797200 Weak transcription Lung lung
19 chr7:96789600-96805200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr7:96789600-96818400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr7:96790400-96795200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr7:96790400-96814600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr7:96790600-96795200 Weak transcription K562 blood
24 chr7:96790600-96796400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr7:96790600-96796400 Weak transcription Dnd41 blood
26 chr7:96790600-96797000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr7:96790600-96811200 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr7:96790600-96811600 Weak transcription Primary T cells fromperipheralblood blood
29 chr7:96790600-96813600 Weak transcription H1 Cell Line embryonic stem cell
30 chr7:96790600-96813600 Weak transcription Duodenum Mucosa Duodenum
31 chr7:96790800-96796200 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr7:96790800-96797200 Weak transcription Primary B cells from cord blood blood
33 chr7:96790800-96797200 Weak transcription Primary hematopoietic stem cells blood
34 chr7:96791000-96795000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr7:96791000-96796800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr7:96791000-96798000 Weak transcription Primary B cells from peripheral blood blood
37 chr7:96791200-96794600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr7:96791200-96795600 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr7:96791200-96797000 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr7:96791800-96811600 Weak transcription Adipose Nuclei Adipose
41 chr7:96793200-96794600 Strong transcription Primary T cells from cord blood blood
42 chr7:96793600-96797200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr7:96794000-96796000 Weak transcription Fetal Intestine Small intestine
44 chr7:96794200-96796400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr7:96794200-96797000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015