Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:96139858..96141710-chr9:96147382..96149725,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10821156	1.00[CEU][hapmap]
rs10821161	1.00[CEU][hapmap]
rs10992715	1.00[CEU][hapmap];0.94[YRI][hapmap];0.86[AMR][1000 genomes]
rs11999013	0.80[YRI][hapmap]
rs12002078	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12550993	0.89[CEU][hapmap]
rs13293140	0.83[AMR][1000 genomes]
rs13296817	1.00[CEU][hapmap]
rs2254351	1.00[CEU][hapmap]
rs4743925	1.00[CEU][hapmap]
rs4743926	1.00[CEU][hapmap]
rs4744244	1.00[CEU][hapmap]
rs56833280	0.83[AMR][1000 genomes]
rs6479474	0.87[CEU][hapmap]
rs6479489	1.00[CEU][hapmap]
rs6479490	1.00[CEU][hapmap]
rs6479491	1.00[CEU][hapmap]
rs7021710	0.88[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7042943	0.87[CEU][hapmap]
rs7046002	0.89[CEU][hapmap]
rs928367	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893576	chr9:95789960-96158277	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96148600-96153200	Weak transcription	Placenta	Placenta
2	chr9:96149400-96150000	Enhancers	Rectal Mucosa Donor 29	rectum

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