Variant report

Variant	rs12006371
Chromosome Location	chr9:85844325-85844326
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10867954	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10867957	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11139978	0.97[ASN][1000 genomes]
rs11139983	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11139993	0.96[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs11139994	0.96[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11139995	0.88[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs4460465	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4877249	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4877745	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9777605	0.99[ASN][1000 genomes]
rs9777609	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9777611	1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85844000-85844400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
2	chr9:85844200-85850600	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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