Variant report

Variant rs12016
Chromosome Location chr19:19102590-19102591
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19084200-19107800 Weak transcription Right Atrium heart
2 chr19:19096200-19104000 Weak transcription Primary B cells from cord blood blood
3 chr19:19096400-19103400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:19096400-19103600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr19:19096600-19103400 Weak transcription NH-A brain
6 chr19:19096800-19104000 Weak transcription Primary hematopoietic stem cells blood
7 chr19:19097600-19103400 Weak transcription HUVEC blood vessel
8 chr19:19097600-19103600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr19:19098000-19103400 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr19:19098000-19103600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr19:19098000-19103600 Weak transcription Brain Cingulate Gyrus brain
12 chr19:19098000-19103600 Weak transcription Hela-S3 cervix
13 chr19:19098000-19103800 Weak transcription NHEK skin
14 chr19:19098000-19106600 Weak transcription Fetal Kidney kidney
15 chr19:19098200-19103400 Weak transcription K562 blood
16 chr19:19098200-19104600 Weak transcription Stomach Mucosa stomach
17 chr19:19098400-19103600 Weak transcription HepG2 liver
18 chr19:19098600-19109800 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr19:19098800-19103400 Weak transcription H9 Cell Line embryonic stem cell
20 chr19:19099000-19103400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr19:19099000-19103400 Weak transcription HSMMtube muscle
22 chr19:19099000-19103600 Weak transcription HSMM muscle
23 chr19:19099200-19103800 Weak transcription Colon Smooth Muscle Colon
24 chr19:19099400-19105400 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr19:19099600-19103600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr19:19100200-19105800 Strong transcription Brain Inferior Temporal Lobe brain
27 chr19:19100200-19117400 Strong transcription Fetal Intestine Small intestine
28 chr19:19100400-19103000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr19:19100400-19103600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr19:19100600-19103600 Weak transcription Rectal Smooth Muscle rectum
31 chr19:19100600-19106000 Strong transcription Fetal Intestine Large intestine
32 chr19:19100600-19122800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr19:19100800-19102600 Enhancers Fetal Heart heart
34 chr19:19100800-19103400 Strong transcription Fetal Brain Female brain
35 chr19:19100800-19106400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr19:19100800-19106400 Strong transcription Fetal Muscle Trunk muscle
37 chr19:19100800-19106600 Strong transcription Fetal Muscle Leg muscle
38 chr19:19101000-19102600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr19:19101000-19102600 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr19:19101000-19103600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr19:19101000-19103800 Strong transcription Brain Germinal Matrix brain
42 chr19:19101000-19105600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr19:19101000-19105600 Strong transcription Fetal Stomach stomach
44 chr19:19101000-19105800 Strong transcription Brain Hippocampus Middle brain
45 chr19:19101000-19106400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr19:19101000-19106400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:19101000-19106400 Strong transcription Fetal Adrenal Gland Adrenal Gland
48 chr19:19101000-19107200 Strong transcription Esophagus oesophagus
49 chr19:19101000-19109400 Strong transcription Lung lung
50 chr19:19101000-19109800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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