The 2.0 version of rSNPBase

Variant report

Variant rs916898
Chromosome Location chr19:19179819-19179820
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19175400-19207800 Weak transcription Aorta Aorta
2 chr19:19176000-19184600 Weak transcription Spleen Spleen
3 chr19:19176200-19185800 Weak transcription Ovary ovary
4 chr19:19176200-19186000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr19:19176400-19180000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr19:19176400-19180000 Weak transcription Brain Anterior Caudate brain
7 chr19:19176400-19180000 Weak transcription Colon Smooth Muscle Colon
8 chr19:19176400-19180000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr19:19176400-19180000 Weak transcription Left Ventricle heart
10 chr19:19176400-19180000 Weak transcription Lung lung
11 chr19:19176400-19180600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr19:19176400-19180600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr19:19176400-19181200 Weak transcription Fetal Intestine Small intestine
14 chr19:19176400-19182000 Weak transcription Small Intestine intestine
15 chr19:19176400-19183600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr19:19176400-19186200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr19:19176400-19189200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr19:19176400-19190400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr19:19176400-19190600 Weak transcription Esophagus oesophagus
20 chr19:19176400-19192600 Weak transcription Muscle Satellite Cultured Cells --
21 chr19:19176400-19192600 Weak transcription Right Atrium heart
22 chr19:19176400-19215200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr19:19176400-19215800 Weak transcription Rectal Smooth Muscle rectum
24 chr19:19176400-19215800 Weak transcription NHLF lung
25 chr19:19176600-19180000 Enhancers Primary B cells from peripheral blood blood
26 chr19:19176600-19180000 Enhancers Primary T cells fromperipheralblood blood
27 chr19:19176600-19180000 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr19:19176600-19180000 Weak transcription Fetal Lung lung
29 chr19:19176600-19180000 Enhancers Skeletal Muscle Male skeletal muscle
30 chr19:19176600-19181600 Weak transcription Thymus Thymus
31 chr19:19176600-19184800 Weak transcription Duodenum Mucosa Duodenum
32 chr19:19176600-19185000 Weak transcription Primary hematopoietic stem cells blood
33 chr19:19176600-19185000 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr19:19176600-19185000 Weak transcription Fetal Brain Male brain
35 chr19:19176600-19186800 Weak transcription Dnd41 blood
36 chr19:19176600-19187200 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr19:19176600-19187400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr19:19176600-19188400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr19:19176600-19190200 Weak transcription Fetal Kidney kidney
40 chr19:19176600-19194400 Weak transcription Placenta Amnion Placenta Amnion
41 chr19:19176600-19206800 Weak transcription Fetal Brain Female brain
42 chr19:19176600-19207200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr19:19176600-19208200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr19:19177000-19185400 Weak transcription Stomach Smooth Muscle stomach
45 chr19:19177000-19210000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr19:19177200-19204800 Weak transcription Fetal Intestine Large intestine
47 chr19:19177200-19215400 Weak transcription Colonic Mucosa Colon
48 chr19:19177800-19180000 Weak transcription Psoas Muscle Psoas
49 chr19:19177800-19180600 Enhancers Fetal Muscle Leg muscle
50 chr19:19178200-19180000 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015