The 2.0 version of rSNPBase

Variant report

Variant rs4808184
Chromosome Location chr19:19217727-19217728
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19180400-19219800 Weak transcription HSMMtube muscle
2 chr19:19180600-19245600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr19:19180600-19248400 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr19:19185400-19221200 Weak transcription Primary hematopoietic stem cells blood
5 chr19:19194600-19229400 Weak transcription Dnd41 blood
6 chr19:19197400-19222600 Weak transcription GM12878-XiMat blood
7 chr19:19203800-19245600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr19:19206600-19229600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr19:19208600-19221400 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr19:19209000-19223600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr19:19209400-19221000 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr19:19210200-19230200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr19:19212400-19217800 Weak transcription Primary T cells from cord blood blood
14 chr19:19212400-19218400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr19:19212400-19218400 Weak transcription Brain Substantia Nigra brain
16 chr19:19212400-19221000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr19:19212400-19221400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr19:19212600-19218400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr19:19212600-19218600 Weak transcription Brain Hippocampus Middle brain
20 chr19:19212600-19220600 Weak transcription Primary T cells fromperipheralblood blood
21 chr19:19212600-19221600 Weak transcription Brain Angular Gyrus brain
22 chr19:19212600-19229600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr19:19212600-19240800 Weak transcription Aorta Aorta
24 chr19:19212800-19221200 Weak transcription Gastric stomach
25 chr19:19213200-19218200 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr19:19214200-19221200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr19:19214600-19218200 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr19:19215400-19220800 Strong transcription Liver Liver
29 chr19:19215600-19219000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr19:19216000-19221000 Weak transcription Spleen Spleen
31 chr19:19216600-19217800 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr19:19216600-19218600 Weak transcription Pancreas Pancrea
33 chr19:19216600-19223200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr19:19216800-19218600 Weak transcription Left Ventricle heart
35 chr19:19216800-19218800 Weak transcription Brain Cingulate Gyrus brain
36 chr19:19216800-19219800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr19:19217000-19218600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr19:19217000-19220000 Strong transcription Primary B cells from peripheral blood blood
39 chr19:19217000-19221000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr19:19217000-19221200 Weak transcription Primary B cells from cord blood blood
41 chr19:19217000-19221200 Weak transcription Right Ventricle heart
42 chr19:19217000-19236800 Weak transcription Hela-S3 cervix
43 chr19:19217200-19218000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr19:19217200-19218400 Enhancers Placenta Placenta
45 chr19:19217200-19218400 Weak transcription K562 blood
46 chr19:19217200-19218600 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr19:19217200-19218600 Weak transcription Brain Anterior Caudate brain
48 chr19:19217200-19219800 Strong transcription Brain Inferior Temporal Lobe brain
49 chr19:19217200-19220200 Weak transcription HepG2 liver
50 chr19:19217200-19220600 Weak transcription A549 lung

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Last update: Aug 31, 2015