The 2.0 version of rSNPBase

Variant report

Variant rs7250131
Chromosome Location chr19:19190288-19190289
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19175400-19207800 Weak transcription Aorta Aorta
2 chr19:19176400-19190400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr19:19176400-19190600 Weak transcription Esophagus oesophagus
4 chr19:19176400-19192600 Weak transcription Muscle Satellite Cultured Cells --
5 chr19:19176400-19192600 Weak transcription Right Atrium heart
6 chr19:19176400-19215200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr19:19176400-19215800 Weak transcription Rectal Smooth Muscle rectum
8 chr19:19176400-19215800 Weak transcription NHLF lung
9 chr19:19176600-19194400 Weak transcription Placenta Amnion Placenta Amnion
10 chr19:19176600-19206800 Weak transcription Fetal Brain Female brain
11 chr19:19176600-19207200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr19:19176600-19208200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr19:19177000-19210000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr19:19177200-19204800 Weak transcription Fetal Intestine Large intestine
15 chr19:19177200-19215400 Weak transcription Colonic Mucosa Colon
16 chr19:19178400-19204800 Weak transcription HepG2 liver
17 chr19:19178600-19198400 Weak transcription Brain Substantia Nigra brain
18 chr19:19180200-19216000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr19:19180400-19192200 Weak transcription Placenta Placenta
20 chr19:19180400-19192400 Weak transcription Adipose Nuclei Adipose
21 chr19:19180400-19192400 Weak transcription Left Ventricle heart
22 chr19:19180400-19194600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr19:19180400-19195800 Weak transcription Brain Cingulate Gyrus brain
24 chr19:19180400-19207200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr19:19180400-19207800 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr19:19180400-19208000 Weak transcription Brain Angular Gyrus brain
27 chr19:19180400-19208000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr19:19180400-19208200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr19:19180400-19216400 Weak transcription Colon Smooth Muscle Colon
30 chr19:19180400-19219800 Weak transcription HSMMtube muscle
31 chr19:19180600-19208200 Weak transcription Fetal Lung lung
32 chr19:19180600-19213600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr19:19180600-19245600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr19:19180600-19248400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr19:19184000-19190600 Strong transcription Primary T cells from cord blood blood
36 chr19:19184000-19190600 Weak transcription Gastric stomach
37 chr19:19185400-19190800 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr19:19185400-19192200 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr19:19185400-19194800 Strong transcription Stomach Smooth Muscle stomach
40 chr19:19185400-19208400 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr19:19185400-19221200 Weak transcription Primary hematopoietic stem cells blood
42 chr19:19185600-19190600 Weak transcription Lung lung
43 chr19:19185600-19192000 Weak transcription Fetal Brain Male brain
44 chr19:19185600-19192400 Weak transcription Psoas Muscle Psoas
45 chr19:19185600-19194400 Weak transcription Brain Germinal Matrix brain
46 chr19:19185600-19198600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:19185600-19198600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr19:19185600-19207200 Weak transcription Duodenum Mucosa Duodenum
49 chr19:19185600-19211400 Weak transcription Pancreas Pancrea
50 chr19:19186400-19206800 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015