Variant report

Variant rs2872394
Chromosome Location chr19:19171121-19171122
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19145000-19174000 Weak transcription Small Intestine intestine
2 chr19:19145400-19171800 Weak transcription Right Atrium heart
3 chr19:19145600-19172200 Weak transcription Stomach Mucosa stomach
4 chr19:19145600-19173800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr19:19145600-19173800 Weak transcription Fetal Kidney kidney
6 chr19:19151000-19173800 Weak transcription Fetal Brain Male brain
7 chr19:19151800-19173800 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr19:19151800-19173800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr19:19152600-19173200 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr19:19152800-19171400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr19:19153200-19171200 Strong transcription HUES64 Cell Line embryonic stem cell
12 chr19:19153200-19171400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr19:19153200-19172200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr19:19153200-19173600 Strong transcription Fetal Stomach stomach
15 chr19:19153400-19171200 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr19:19156600-19172800 Strong transcription Dnd41 blood
17 chr19:19159800-19171400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr19:19160200-19172400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:19160400-19173000 Strong transcription Thymus Thymus
20 chr19:19160400-19173600 Strong transcription Fetal Brain Female brain
21 chr19:19161600-19171200 Strong transcription Spleen Spleen
22 chr19:19161600-19172400 Strong transcription NHLF lung
23 chr19:19161800-19172800 Strong transcription Brain Germinal Matrix brain
24 chr19:19162000-19171200 Strong transcription Esophagus oesophagus
25 chr19:19162000-19173000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr19:19162400-19172400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr19:19162800-19173800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr19:19163000-19172400 Strong transcription Lung lung
29 chr19:19164200-19171800 Weak transcription Fetal Heart heart
30 chr19:19164600-19171200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr19:19165200-19172400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr19:19165400-19172800 Weak transcription Hela-S3 cervix
33 chr19:19165800-19173000 Weak transcription NHDF-Ad bronchial
34 chr19:19166000-19172800 Weak transcription HUVEC blood vessel
35 chr19:19166000-19173800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr19:19166200-19173800 Weak transcription Colon Smooth Muscle Colon
37 chr19:19166400-19173800 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr19:19166400-19174000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr19:19166600-19173400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr19:19166800-19172000 Weak transcription HSMMtube muscle
41 chr19:19167000-19172800 Weak transcription NH-A brain
42 chr19:19167000-19173800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr19:19167400-19173800 Genic enhancers Fetal Muscle Trunk muscle
44 chr19:19167400-19173800 Genic enhancers Fetal Muscle Leg muscle
45 chr19:19168400-19171200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr19:19168400-19172200 Weak transcription HSMM muscle
47 chr19:19168400-19173200 Weak transcription A549 lung
48 chr19:19168600-19173200 Weak transcription Primary hematopoietic stem cells blood
49 chr19:19168600-19173200 Weak transcription Osteobl bone
50 chr19:19168600-19173800 Weak transcription Primary B cells from cord blood blood

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