The 2.0 version of rSNPBase

Variant report

Variant rs2012318
Chromosome Location chr19:19208240-19208241
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19176400-19215200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr19:19176400-19215800 Weak transcription Rectal Smooth Muscle rectum
3 chr19:19176400-19215800 Weak transcription NHLF lung
4 chr19:19177000-19210000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr19:19177200-19215400 Weak transcription Colonic Mucosa Colon
6 chr19:19180200-19216000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr19:19180400-19216400 Weak transcription Colon Smooth Muscle Colon
8 chr19:19180400-19219800 Weak transcription HSMMtube muscle
9 chr19:19180600-19213600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr19:19180600-19245600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr19:19180600-19248400 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr19:19185400-19208400 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr19:19185400-19221200 Weak transcription Primary hematopoietic stem cells blood
14 chr19:19185600-19211400 Weak transcription Pancreas Pancrea
15 chr19:19186800-19215200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr19:19188400-19209800 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr19:19194200-19214000 Weak transcription K562 blood
18 chr19:19194600-19229400 Weak transcription Dnd41 blood
19 chr19:19194800-19211400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr19:19194800-19215400 Weak transcription Placenta Amnion Placenta Amnion
21 chr19:19197400-19222600 Weak transcription GM12878-XiMat blood
22 chr19:19198800-19209000 Weak transcription Brain Hippocampus Middle brain
23 chr19:19199000-19216200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr19:19200800-19215800 Weak transcription Right Atrium heart
25 chr19:19201000-19212400 Strong transcription Primary T cells from cord blood blood
26 chr19:19201800-19215400 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr19:19201800-19215600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr19:19202000-19213800 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr19:19203000-19215600 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr19:19203800-19245600 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr19:19204800-19210600 Enhancers Fetal Intestine Large intestine
32 chr19:19204800-19213800 Strong transcription Fetal Stomach stomach
33 chr19:19204800-19214200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr19:19205200-19210000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr19:19205200-19216400 Strong transcription Primary B cells from peripheral blood blood
36 chr19:19205400-19209000 Enhancers Placenta Placenta
37 chr19:19205400-19212800 Strong transcription Fetal Muscle Leg muscle
38 chr19:19205800-19216200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr19:19206400-19210600 Genic enhancers Fetal Intestine Small intestine
40 chr19:19206400-19212600 Strong transcription Primary T cells fromperipheralblood blood
41 chr19:19206400-19214800 Weak transcription Primary monocytes fromperipheralblood blood
42 chr19:19206600-19209400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr19:19206600-19210600 Strong transcription Fetal Muscle Trunk muscle
44 chr19:19206600-19212200 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr19:19206600-19212800 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr19:19206600-19212800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr19:19206600-19212800 Strong transcription Thymus Thymus
48 chr19:19206600-19229600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr19:19206800-19208600 Strong transcription Esophagus oesophagus
50 chr19:19206800-19211200 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015