Variant report

Variant rs12035900
Chromosome Location chr1:228547901-228547902
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:228511400-228552400 Weak transcription Psoas Muscle Psoas
3 chr1:228527600-228562400 Weak transcription Brain Anterior Caudate brain
4 chr1:228527800-228555800 Weak transcription Gastric stomach
5 chr1:228531200-228549600 Weak transcription Esophagus oesophagus
6 chr1:228531200-228551200 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:228532400-228555200 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:228532400-228562400 Weak transcription Fetal Lung lung
9 chr1:228533200-228548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:228535200-228554200 Weak transcription Right Atrium heart
11 chr1:228537000-228554800 Weak transcription Fetal Intestine Large intestine
12 chr1:228539400-228556000 Genic enhancers Skeletal Muscle Male skeletal muscle
13 chr1:228539600-228548200 Weak transcription Ovary ovary
14 chr1:228540400-228566200 Genic enhancers Skeletal Muscle Female skeletal muscle
15 chr1:228541000-228565200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:228541000-228565400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:228541400-228562000 Weak transcription Brain Germinal Matrix brain
18 chr1:228541600-228562400 Weak transcription Fetal Brain Female brain
19 chr1:228541600-228565800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:228541800-228559800 Weak transcription Lung lung
21 chr1:228542200-228548200 Weak transcription Fetal Intestine Small intestine
22 chr1:228542800-228549800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:228542800-228555000 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr1:228544600-228549600 Weak transcription Primary T cells from cord blood blood
25 chr1:228545800-228548600 Strong transcription Fetal Muscle Trunk muscle
26 chr1:228545800-228562400 Weak transcription HSMMtube muscle
27 chr1:228546000-228549400 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:228546000-228553600 Weak transcription Left Ventricle heart
29 chr1:228546400-228548000 Enhancers Spleen Spleen
30 chr1:228546400-228550000 Enhancers Fetal Heart heart
31 chr1:228546600-228550600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
32 chr1:228546800-228554000 Strong transcription Fetal Muscle Leg muscle
33 chr1:228547200-228549200 Strong transcription Fetal Stomach stomach
34 chr1:228547400-228548200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:228547800-228548200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:228547800-228549400 Enhancers Pancreas Pancrea
37 chr1:228547800-228550600 Enhancers Right Ventricle heart

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