Variant report

Variant rs3738685
Chromosome Location chr1:228556788-228556789
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228527600-228562400 Weak transcription Brain Anterior Caudate brain
2 chr1:228532400-228562400 Weak transcription Fetal Lung lung
3 chr1:228540400-228566200 Genic enhancers Skeletal Muscle Female skeletal muscle
4 chr1:228541000-228565200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr1:228541000-228565400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:228541400-228562000 Weak transcription Brain Germinal Matrix brain
7 chr1:228541600-228562400 Weak transcription Fetal Brain Female brain
8 chr1:228541600-228565800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:228541800-228559800 Weak transcription Lung lung
10 chr1:228545800-228562400 Weak transcription HSMMtube muscle
11 chr1:228553200-228566400 Weak transcription Psoas Muscle Psoas
12 chr1:228553800-228557000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:228554000-228557000 Bivalent Enhancer Fetal Muscle Trunk muscle
14 chr1:228554200-228557200 Enhancers Spleen Spleen
15 chr1:228554200-228558000 Enhancers Right Atrium heart
16 chr1:228555000-228559600 Bivalent Enhancer Placenta Placenta
17 chr1:228555200-228557600 Flanking Active TSS K562 blood
18 chr1:228555600-228556800 Enhancers Pancreas Pancrea
19 chr1:228555800-228559200 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr1:228555800-228563400 Genic enhancers Fetal Muscle Leg muscle
21 chr1:228556000-228556800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:228556000-228556800 Active TSS Left Ventricle heart
23 chr1:228556000-228557000 Flanking Active TSS Fetal Intestine Large intestine
24 chr1:228556000-228557600 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
25 chr1:228556000-228558600 Flanking Active TSS Fetal Heart heart
26 chr1:228556000-228558800 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
27 chr1:228556000-228560400 Weak transcription Ovary ovary
28 chr1:228556000-228565400 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:228556200-228557800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:228556200-228559200 Weak transcription Gastric stomach
31 chr1:228556200-228560400 Strong transcription Fetal Stomach stomach
32 chr1:228556200-228562200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:228556200-228565400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr1:228556400-228558000 Bivalent Enhancer HepG2 liver
35 chr1:228556600-228556800 Flanking Active TSS Right Ventricle heart
36 chr1:228556600-228556800 Bivalent Enhancer Stomach Smooth Muscle stomach
37 chr1:228556600-228558000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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