Variant report

Variant rs936885
Chromosome Location chr1:228464842-228464843
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228455400-228484800 Weak transcription A549 lung
2 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
3 chr1:228457200-228472000 Weak transcription Fetal Heart heart
4 chr1:228459800-228469600 Weak transcription HSMMtube muscle
5 chr1:228463000-228465000 Enhancers Fetal Brain Male brain
6 chr1:228463400-228465000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
7 chr1:228463800-228481400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:228464000-228472200 Weak transcription Small Intestine intestine
9 chr1:228464200-228465000 Flanking Active TSS Brain Germinal Matrix brain
10 chr1:228464200-228466400 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:228464200-228470400 Weak transcription HMEC breast
12 chr1:228464200-228470600 Weak transcription Aorta Aorta
13 chr1:228464200-228473800 Weak transcription Psoas Muscle Psoas
14 chr1:228464200-228473800 Weak transcription NHEK skin
15 chr1:228464200-228478000 Strong transcription Dnd41 blood
16 chr1:228464200-228491600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:228464400-228465000 Enhancers H1 Cell Line embryonic stem cell
18 chr1:228464400-228465000 Enhancers Esophagus oesophagus
19 chr1:228464400-228465000 Enhancers Ovary ovary
20 chr1:228464400-228465000 Enhancers Pancreas Pancrea
21 chr1:228464400-228465000 Genic enhancers Right Ventricle heart
22 chr1:228464400-228465200 Enhancers Gastric stomach
23 chr1:228464400-228465400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:228464400-228465800 Enhancers Spleen Spleen
25 chr1:228464400-228466200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
26 chr1:228464400-228466200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr1:228464400-228466200 Weak transcription Fetal Intestine Large intestine
28 chr1:228464400-228466200 Weak transcription Fetal Lung lung
29 chr1:228464400-228466200 Weak transcription Placenta Amnion Placenta Amnion
30 chr1:228464400-228466400 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:228464400-228466400 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:228464400-228467000 Weak transcription Brain Cingulate Gyrus brain
33 chr1:228464400-228467600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr1:228464400-228468000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:228464400-228468400 Weak transcription Rectal Smooth Muscle rectum
36 chr1:228464400-228469200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:228464400-228470600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr1:228464400-228470600 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr1:228464400-228471800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:228464400-228472000 Genic enhancers Skeletal Muscle Female skeletal muscle
41 chr1:228464400-228473000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:228464400-228478400 Strong transcription Thymus Thymus
43 chr1:228464400-228479600 Weak transcription Right Atrium heart
44 chr1:228464400-228481400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:228464400-228482000 Weak transcription Fetal Kidney kidney
46 chr1:228464400-228489200 Strong transcription Left Ventricle heart
47 chr1:228464600-228465000 Enhancers ES-WA7 Cell Line embryonic stem cell
48 chr1:228464600-228465000 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr1:228464600-228465000 Enhancers Primary B cells from peripheral blood blood
50 chr1:228464600-228465000 Enhancers Primary T cells fromperipheralblood blood

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