Variant report

Variant rs419173
Chromosome Location chr1:228495696-228495697
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228465000-228498000 Weak transcription Fetal Brain Male brain
2 chr1:228487200-228504600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:228490400-228500800 Strong transcription Right Ventricle heart
4 chr1:228490600-228500200 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr1:228490800-228495800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:228490800-228498000 Weak transcription Dnd41 blood
7 chr1:228490800-228500200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:228490800-228506800 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr1:228491000-228497800 Weak transcription Fetal Kidney kidney
10 chr1:228491000-228498400 Weak transcription Primary hematopoietic stem cells blood
11 chr1:228491000-228499200 Weak transcription Right Atrium heart
12 chr1:228491000-228499800 Weak transcription Pancreas Pancrea
13 chr1:228491200-228496800 Weak transcription Psoas Muscle Psoas
14 chr1:228491200-228497800 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr1:228491200-228499400 Weak transcription Thymus Thymus
16 chr1:228491400-228496400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr1:228491400-228498400 Weak transcription Ovary ovary
18 chr1:228491600-228498600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:228491600-228498600 Weak transcription Duodenum Mucosa Duodenum
20 chr1:228491600-228505800 Genic enhancers Skeletal Muscle Male skeletal muscle
21 chr1:228491800-228498200 Weak transcription Brain Germinal Matrix brain
22 chr1:228491800-228499400 Weak transcription Gastric stomach
23 chr1:228492000-228497800 Weak transcription Fetal Heart heart
24 chr1:228492000-228498000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:228492000-228499400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:228492200-228497200 Weak transcription Fetal Intestine Small intestine
27 chr1:228492200-228498800 Strong transcription Fetal Muscle Leg muscle
28 chr1:228492200-228499000 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:228492200-228503800 Genic enhancers Skeletal Muscle Female skeletal muscle
30 chr1:228492400-228496800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:228492400-228497600 Weak transcription Primary T cells from cord blood blood
32 chr1:228492400-228497600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:228492400-228497800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:228492400-228499000 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:228492600-228497600 Weak transcription Fetal Lung lung
36 chr1:228492600-228499600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:228492800-228499600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr1:228493200-228496200 Weak transcription Left Ventricle heart
39 chr1:228493200-228499200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:228493400-228495800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:228493400-228496200 Weak transcription Fetal Stomach stomach
42 chr1:228493400-228497600 Weak transcription HSMMtube muscle
43 chr1:228493400-228497800 Weak transcription Brain Anterior Caudate brain
44 chr1:228493600-228497000 Weak transcription Fetal Brain Female brain
45 chr1:228494800-228496200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
46 chr1:228494800-228498600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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