Variant report

Variant rs12047120
Chromosome Location chr1:46478496-46478497
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46461400-46488000 Weak transcription Muscle Satellite Cultured Cells --
2 chr1:46464600-46478800 Strong transcription Rectal Mucosa Donor 29 rectum
3 chr1:46464600-46479200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:46464800-46479400 Strong transcription Fetal Muscle Trunk muscle
5 chr1:46465000-46479200 Strong transcription Fetal Stomach stomach
6 chr1:46466400-46478600 Strong transcription Sigmoid Colon Sigmoid Colon
7 chr1:46468000-46479800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:46468400-46479400 Strong transcription Fetal Intestine Small intestine
9 chr1:46468600-46479600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:46469400-46487600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:46469800-46488000 Weak transcription Esophagus oesophagus
12 chr1:46470400-46479600 Strong transcription Fetal Muscle Leg muscle
13 chr1:46470400-46479600 Strong transcription Rectal Mucosa Donor 31 rectum
14 chr1:46470400-46479800 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr1:46470600-46489800 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:46471000-46479000 Strong transcription Fetal Intestine Large intestine
17 chr1:46471200-46479600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:46471200-46479600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:46471400-46478800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:46471400-46479000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr1:46471600-46479000 Strong transcription Liver Liver
22 chr1:46471600-46479600 Strong transcription H1 Cell Line embryonic stem cell
23 chr1:46471800-46478800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:46471800-46479000 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr1:46471800-46479000 Strong transcription HUES6 Cell Line embryonic stem cell
26 chr1:46471800-46479600 Strong transcription HUES64 Cell Line embryonic stem cell
27 chr1:46472000-46478600 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr1:46472000-46479800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:46472000-46487800 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr1:46472200-46479600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:46472200-46487600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:46473000-46478800 Strong transcription Right Ventricle heart
33 chr1:46473000-46500400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr1:46473600-46502600 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:46474400-46484600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:46474400-46487600 Weak transcription Gastric stomach
37 chr1:46474400-46502600 Weak transcription Primary B cells from peripheral blood blood
38 chr1:46474600-46484600 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:46474600-46488400 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr1:46474600-46490400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:46474600-46496600 Weak transcription Fetal Thymus thymus
42 chr1:46474800-46484800 Weak transcription Right Atrium heart
43 chr1:46474800-46487200 Weak transcription Brain Cingulate Gyrus brain
44 chr1:46474800-46487800 Weak transcription HMEC breast
45 chr1:46474800-46488200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr1:46475000-46488200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:46475400-46487400 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr1:46475600-46525000 Weak transcription Fetal Kidney kidney
49 chr1:46475800-46487400 Weak transcription Brain Substantia Nigra brain
50 chr1:46476200-46479000 Strong transcription Skeletal Muscle Female skeletal muscle

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