Variant report

Variant rs3795318
Chromosome Location chr1:46495024-46495025
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46473000-46500400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:46473600-46502600 Weak transcription Primary T cells fromperipheralblood blood
3 chr1:46474400-46502600 Weak transcription Primary B cells from peripheral blood blood
4 chr1:46474600-46496600 Weak transcription Fetal Thymus thymus
5 chr1:46475600-46525000 Weak transcription Fetal Kidney kidney
6 chr1:46476200-46502600 Weak transcription Stomach Mucosa stomach
7 chr1:46476400-46495200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr1:46476600-46515800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:46477400-46496000 Weak transcription Small Intestine intestine
10 chr1:46484800-46502000 Strong transcription Fetal Intestine Small intestine
11 chr1:46485000-46502000 Strong transcription Fetal Stomach stomach
12 chr1:46485800-46503000 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:46486800-46502400 Strong transcription Primary neutrophils fromperipheralblood blood
14 chr1:46487000-46496600 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr1:46487000-46502000 Strong transcription Fetal Muscle Trunk muscle
16 chr1:46487200-46500800 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr1:46487200-46501600 Strong transcription Fetal Brain Female brain
18 chr1:46487600-46501600 Strong transcription Sigmoid Colon Sigmoid Colon
19 chr1:46488800-46501800 Strong transcription Fetal Muscle Leg muscle
20 chr1:46488800-46505200 Weak transcription HMEC breast
21 chr1:46489800-46495400 Weak transcription Primary B cells from cord blood blood
22 chr1:46490000-46497800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:46490200-46495400 Weak transcription Pancreas Pancrea
24 chr1:46490200-46496200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:46490200-46496400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:46490200-46524600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:46490400-46495600 Weak transcription A549 lung
28 chr1:46490400-46498600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:46490600-46495600 Weak transcription Primary T cells from cord blood blood
30 chr1:46490600-46505000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr1:46490600-46525200 Weak transcription NH-A brain
32 chr1:46491400-46495200 Weak transcription Gastric stomach
33 chr1:46492000-46507600 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:46492200-46501400 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr1:46492400-46495200 Weak transcription Psoas Muscle Psoas
36 chr1:46492600-46500400 Strong transcription H1 Cell Line embryonic stem cell
37 chr1:46492600-46502000 Strong transcription Fetal Intestine Large intestine
38 chr1:46492800-46498400 Strong transcription HSMMtube muscle
39 chr1:46492800-46501200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:46492800-46502000 Strong transcription Brain Germinal Matrix brain
41 chr1:46493000-46498200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:46493000-46498400 Strong transcription Brain Hippocampus Middle brain
43 chr1:46493000-46498400 Strong transcription HepG2 liver
44 chr1:46493000-46498600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:46493000-46498600 Strong transcription NHEK skin
46 chr1:46493000-46498800 Strong transcription Rectal Mucosa Donor 29 rectum
47 chr1:46493000-46501200 Strong transcription Duodenum Mucosa Duodenum
48 chr1:46493000-46501600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:46493000-46502400 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr1:46493000-46509200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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