The 2.0 version of rSNPBase

Variant report

Variant rs72677556
Chromosome Location chr1:46602294-46602295
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46599200-46603200 Weak transcription Ovary ovary
2 chr1:46599400-46603200 Weak transcription Liver Liver
3 chr1:46599600-46603200 Weak transcription HSMMtube muscle
4 chr1:46599600-46604000 Enhancers Cortex derived primary cultured neurospheres brain
5 chr1:46599800-46603200 Weak transcription Duodenum Mucosa Duodenum
6 chr1:46600000-46602400 Weak transcription H1 Cell Line embryonic stem cell
7 chr1:46600000-46602400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:46600000-46602600 Weak transcription Fetal Kidney kidney
9 chr1:46600000-46603200 Weak transcription HUVEC blood vessel
10 chr1:46600000-46604000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:46600200-46603200 Weak transcription Fetal Intestine Large intestine
12 chr1:46600200-46603200 Weak transcription Fetal Lung lung
13 chr1:46600400-46602400 Weak transcription Aorta Aorta
14 chr1:46600400-46602400 Weak transcription Right Atrium heart
15 chr1:46600600-46603400 Weak transcription HSMM muscle
16 chr1:46600800-46602400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:46600800-46602600 Weak transcription Brain Cingulate Gyrus brain
18 chr1:46601000-46603000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:46601000-46603200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:46601000-46603200 Weak transcription Adipose Nuclei Adipose
21 chr1:46601000-46603200 Weak transcription NHLF lung
22 chr1:46601000-46603400 Weak transcription K562 blood
23 chr1:46601000-46603400 Weak transcription NH-A brain
24 chr1:46601200-46603000 Enhancers Fetal Heart heart
25 chr1:46601200-46603200 Weak transcription Fetal Stomach stomach
26 chr1:46601200-46603400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:46601400-46602800 Enhancers Brain Germinal Matrix brain
28 chr1:46601400-46603200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:46601400-46603200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:46601400-46603200 Weak transcription Osteobl bone
31 chr1:46601400-46603400 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:46601400-46603600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:46601600-46602400 Weak transcription Fetal Muscle Leg muscle
34 chr1:46601600-46602400 Weak transcription Left Ventricle heart
35 chr1:46601600-46602600 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:46601600-46603200 Enhancers Hela-S3 cervix
37 chr1:46601800-46603200 Weak transcription Fetal Muscle Trunk muscle
38 chr1:46602200-46602600 Enhancers Pancreatic Islets Pancreatic Islet
39 chr1:46602200-46602600 Enhancers Skeletal Muscle Female skeletal muscle
40 chr1:46602200-46603000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr1:46602200-46603800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:46602200-46604000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:46602200-46604000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:46602200-46604000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015