The 2.0 version of rSNPBase

Variant report

Variant rs56301932
Chromosome Location chr1:46422086-46422087
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46387600-46425000 Weak transcription Fetal Muscle Trunk muscle
2 chr1:46408400-46425200 Weak transcription Primary B cells from cord blood blood
3 chr1:46415800-46426200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:46416000-46424800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:46419800-46426200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:46420000-46435000 Weak transcription Primary hematopoietic stem cells blood
7 chr1:46420200-46426200 Weak transcription Ovary ovary
8 chr1:46420200-46434800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:46420200-46435000 Weak transcription Right Atrium heart
10 chr1:46420200-46436800 Weak transcription Lung lung
11 chr1:46420200-46437000 Weak transcription Esophagus oesophagus
12 chr1:46420200-46437000 Weak transcription Gastric stomach
13 chr1:46420200-46440200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:46420400-46422600 Enhancers HSMM muscle
15 chr1:46420400-46423800 Enhancers Skeletal Muscle Male skeletal muscle
16 chr1:46420400-46424800 Weak transcription Fetal Muscle Leg muscle
17 chr1:46420400-46425000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:46420400-46425000 Weak transcription Fetal Stomach stomach
19 chr1:46420400-46425000 Weak transcription HepG2 liver
20 chr1:46420400-46425200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:46420400-46425200 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:46420400-46426000 Weak transcription Aorta Aorta
23 chr1:46420400-46426200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:46420400-46426400 Weak transcription Fetal Heart heart
25 chr1:46420400-46427000 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:46420400-46434800 Weak transcription Colonic Mucosa Colon
27 chr1:46420400-46436800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:46420400-46437600 Weak transcription H1 Cell Line embryonic stem cell
29 chr1:46420400-46443000 Weak transcription Fetal Lung lung
30 chr1:46420600-46422800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:46420600-46423000 Weak transcription NHEK skin
32 chr1:46420600-46423600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:46420600-46425800 Weak transcription Duodenum Mucosa Duodenum
34 chr1:46420600-46426200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:46420600-46426800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:46420600-46428000 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:46420600-46434800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:46420600-46436600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:46420600-46443000 Weak transcription Adipose Nuclei Adipose
40 chr1:46420600-46455800 Weak transcription HUVEC blood vessel
41 chr1:46420800-46422800 Weak transcription HMEC breast
42 chr1:46420800-46423200 Weak transcription Small Intestine intestine
43 chr1:46420800-46423400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr1:46420800-46423400 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:46420800-46423400 Weak transcription K562 blood
46 chr1:46420800-46424000 Enhancers Skeletal Muscle Female skeletal muscle
47 chr1:46420800-46424800 Weak transcription HSMMtube muscle
48 chr1:46420800-46425000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:46420800-46425000 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr1:46420800-46425000 Weak transcription NH-A brain

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Last update: Aug 31, 2015