Variant report

Variant	rs1355641
Chromosome Location	chr1:46599143-46599144
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:285)
CpG islands
(count:61)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:285 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAZ	chr1:46598056-46599249	Hela-S3	cervix:	n/a	n/a
2	MAX	chr1:46598042-46599389	HepG2	liver:	n/a	n/a
3	GABPA	chr1:46598031-46599346	K562	blood:	n/a	n/a
4	RCOR1	chr1:46599137-46599304	HepG2	liver:	n/a	n/a
5	CBX3	chr1:46597846-46599310	K562	blood:	n/a	n/a
6	POLR2A	chr1:46597328-46599465	Hela-S3	cervix:	n/a	n/a
7	POLR2A	chr1:46597226-46599439	MCF-7	breast:	n/a	n/a
8	POLR2A	chr1:46597963-46599381	Hela-S3	cervix:	n/a	n/a
9	CCNT2	chr1:46597988-46599182	K562	blood:	n/a	n/a
10	CREB1	chr1:46598032-46599318	HepG2	liver:	n/a	n/a
11	SP1	chr1:46597994-46599276	A549	lung:	n/a	chr1:46598783-46598804 chr1:46598351-46598360 chr1:46598679-46598700 chr1:46598351-46598364 chr1:46598350-46598359 chr1:46598350-46598359
12	POLR2A	chr1:46598553-46599147	H1-hESC	embryonic stem cell:	n/a	n/a
13	POLR2A	chr1:46597267-46599352	SK-N-SH	brain:	n/a	n/a
14	EBF1	chr1:46598939-46599320	GM12878	blood:	n/a	chr1:46599150-46599159 chr1:46599150-46599160
15	MAX	chr1:46598097-46599273	NB4	blood:	n/a	n/a
16	POLR2A	chr1:46597625-46599494	ECC-1	luminal epithelium:	n/a	n/a
17	UBTF	chr1:46597325-46599320	K562	blood:	n/a	n/a
18	EP300	chr1:46598123-46599169	MCF-7	breast:	n/a	chr1:46598803-46598812 chr1:46598799-46598815 chr1:46598801-46598810
19	POLR2A	chr1:46597697-46599402	K562	blood:	n/a	n/a
20	MAX	chr1:46598021-46599408	MCF-7	breast:	n/a	n/a
21	PBX3	chr1:46597967-46599360	SK-N-SH	brain:	n/a	chr1:46598785-46598794
22	POLR2A	chr1:46597981-46599466	GM12892	blood:	n/a	n/a
23	CTCF	chr1:46599060-46599210	GM12873	blood:	n/a	n/a
24	RELA	chr1:46597848-46599324	GM19099	blood:	n/a	n/a
25	POLR2A	chr1:46597980-46599351	GM12878	blood:	n/a	n/a
26	MYC	chr1:46598056-46599260	K562	blood:	n/a	n/a
27	POLR2A	chr1:46598540-46599262	K562	blood:	n/a	n/a
28	POLR2A	chr1:46597936-46599449	HUVEC	blood vessel:	n/a	n/a
29	MAX	chr1:46598405-46599249	H1-hESC	embryonic stem cell:	n/a	n/a
30	FOXM1	chr1:46598009-46599321	ECC-1	luminal epithelium:	n/a	n/a
31	HEY1	chr1:46598850-46599323	K562	blood:	n/a	n/a
32	GTF2F1	chr1:46597929-46599327	Hela-S3	cervix:	n/a	n/a
33	POLR2A	chr1:46597834-46599491	GM12892	blood:	n/a	n/a
34	SIN3A	chr1:46597078-46599412	H1-hESC	embryonic stem cell:	n/a	chr1:46598597-46598606
35	SP1	chr1:46598069-46599371	HCT-116	colon:	n/a	chr1:46598783-46598804 chr1:46598351-46598360 chr1:46598679-46598700 chr1:46598351-46598364 chr1:46598350-46598359 chr1:46598350-46598359
36	POLR2A	chr1:46596953-46600001	GM12891	blood:	n/a	n/a
37	MYC	chr1:46599011-46599148	MCF-7	breast:	n/a	n/a
38	CBX3	chr1:46597893-46599305	HCT-116	colon:	n/a	n/a
39	POLR2A	chr1:46598051-46599256	K562	blood:	n/a	n/a
40	CTCF	chr1:46599092-46599164	GM19240	blood:	n/a	n/a
41	NFIC	chr1:46597778-46599322	GM12878	blood:	n/a	n/a
42	POLR2A	chr1:46598579-46599293	GM12892	blood:	n/a	n/a
43	ZKSCAN1	chr1:46598059-46599306	Hela-S3	cervix:	n/a	n/a
44	SMC3	chr1:46597740-46599301	Hela-S3	cervix:	n/a	n/a
45	POLR2A	chr1:46597831-46599281	Hela-S3	cervix:	n/a	n/a
46	POLR2A	chr1:46598028-46599235	K562	blood:	n/a	n/a
47	GTF2F1	chr1:46598137-46599214	K562	blood:	n/a	n/a
48	POLR2A	chr1:46598918-46599319	H1-hESC	embryonic stem cell:	n/a	n/a
49	MAX	chr1:46598043-46599307	MCF-7	breast:	n/a	n/a
50	POLR2A	chr1:46597463-46599441	MCF-7	breast:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:46599128-46599178	CMK	blood:	n/a
2	chr1:46599128-46599178	SK-N-SH	brain:	n/a
3	chr1:46599128-46599178	A549	lung:	n/a
4	chr1:46599128-46599178	NB4	blood:	n/a
5	chr1:46599128-46599178	HCT-116	colon:	n/a
6	chr1:46599128-46599178	GM12878	blood:	n/a
7	chr1:46599128-46599178	Hepatocyte	liver:	n/a
8	chr1:46599128-46599178	SK-N-MC	brain:	n/a
9	chr1:46599128-46599178	HCPEpiC	choroid plexus:	n/a
10	chr1:46599128-46599178	AG04450	lung:	fetal
11	chr1:46599128-46599178	HPAEpiC	pulmonary alveolar:	n/a
12	chr1:46599128-46599178	HRE	kidney:	n/a
13	chr1:46599128-46599178	ECC-1	luminal epithelium:	n/a
14	chr1:46599128-46599178	RPTEC	kidney:	n/a
15	chr1:46599128-46599178	HL-60	blood:	n/a
16	chr1:46599128-46599178	Jurkat	blood:	n/a
17	chr1:46599128-46599178	GM12892	blood:	n/a
18	chr1:46599128-46599178	NHDF-neo	bronchial:	n/a
19	chr1:46599128-46599178	GM12891	blood:	n/a
20	chr1:46599128-46599178	SKMC	muscle:	n/a
21	chr1:46599128-46599178	IMR90	lung:	fetal
22	chr1:46599128-46599178	HMEC	breast:	n/a
23	chr1:46599128-46599178	HIPEpiC	eye:	n/a
24	chr1:46599128-46599178	BE2_C	brain:	n/a
25	chr1:46599128-46599178	BJ	skin:	n/a
26	chr1:46599128-46599178	PANC-1	pancreas:	n/a
27	chr1:46599128-46599178	ProgFib	skin:	n/a
28	chr1:46599128-46599178	MCF10A-Er-Src	breast:	n/a
29	chr1:46599128-46599178	AG10803	skin:	n/a
30	chr1:46599128-46599178	HRPEpiC	eye:	n/a
31	chr1:46599128-46599178	HCM	heart:	n/a
32	chr1:46599128-46599178	K562	blood:	n/a
33	chr1:46599128-46599178	Hela-S3	cervix:	n/a
34	chr1:46599128-46599178	HNPCEpiC	eye:	n/a
35	chr1:46599128-46599178	HUVEC	blood vessel:	n/a
36	chr1:46599128-46599178	AG04449	skin:	fetal
37	chr1:46599128-46599178	HepG2	liver:	n/a
38	chr1:46599128-46599178	NHBE	bronchial:	n/a
39	chr1:46599128-46599178	SAEC	small airway:	n/a
40	chr1:46599128-46599178	GM19239	blood:	n/a
41	chr1:46599128-46599178	PrEC	prostate:	n/a
42	chr1:46599128-46599178	GM06990	blood:	n/a
43	chr1:46599128-46599178	NT2-D1	testis:	n/a
44	chr1:46599128-46599178	HAEpiC	amniotic membrane:	n/a
45	chr1:46599128-46599178	SK-N-SH_RA	brain:	n/a
46	chr1:46599128-46599178	AG09319	gingival:	n/a
47	chr1:46599128-46599178	HEEpiC	esophagus:	n/a
48	chr1:46599128-46599178	T-47D	breast:	n/a
49	chr1:46599128-46599178	AoSMC	blood vessel:	n/a
50	chr1:46599128-46599178	HRCEpiC	kidney:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:46596666..46599509-chr1:46766938..46769166,2	K562	blood:
2	chr1:46598178..46600574-chr1:46641246..46642770,2	K562	blood:
3	chr1:46597687..46601092-chr1:46685533..46687921,3	MCF-7	breast:
4	chr1:46152742..46154497-chr1:46598104..46600234,2	K562	blood:
5	chr1:46598353..46599286-chr6:31628150..31628675,2	NB4	blood:
6	chr1:46596732..46600061-chr1:46639198..46641036,3	K562	blood:
7	chr1:46596539..46599415-chr1:46667478..46670320,3	K562	blood:
8	chr1:46596990..46600235-chr1:46653510..46656266,3	K562	blood:
9	chr1:46592691..46601867-chr1:46642778..46650670,25	MCF-7	breast:
10	chr1:46593944..46606364-chr1:46632700..46654752,92	MCF-7	breast:
11	chr1:46498806..46500907-chr1:46597285..46600123,2	MCF-7	breast:
12	chr1:46595820..46599539-chr1:46766607..46769915,4	K562	blood:
13	chr1:46590920..46606215-chr1:46630948..46642525,66	MCF-7	breast:
14	chr1:46595304..46602065-chr1:46660247..46665309,8	MCF-7	breast:
15	chr1:46598477..46601244-chr1:46712967..46714555,2	K562	blood:
16	chr1:46597413..46599611-chr12:6976229..6978931,2	K562	blood:
17	chr1:46596689..46599415-chr1:46667615..46670320,3	K562	blood:

No data

Variant related genes	Relation type
PIK3R3	TF binding region
ENSG00000227857	TF binding region
ENSG00000227857	CpG island
PIK3R3	CpG island
ENSG00000117461	Chromatin interaction
ENSG00000085999	Chromatin interaction
ENSG00000132128	Chromatin interaction
ENSG00000111669	Chromatin interaction
ENSG00000086015	Chromatin interaction
ENSG00000085998	Chromatin interaction
ENSG00000173660	Chromatin interaction
ENSG00000171357	Chromatin interaction
ENSG00000117472	Chromatin interaction
ENSG00000250719	Chromatin interaction
ENSG00000204439	Chromatin interaction
ENSG00000159596	Chromatin interaction
ENSG00000159592	Chromatin interaction

Extended variants
information (count: 86 )
Associated
traits (count: 14 )

rSNPs within LD-proxies of this variant (count:72)

rs_ID	r²[population]
rs10749861	1.00[ASN][1000 genomes]
rs10789482	1.00[ASN][1000 genomes]
rs11211247	1.00[ASN][1000 genomes]
rs11580953	1.00[ASN][1000 genomes]
rs11584814	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11587648	0.86[AFR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11805376	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12045409	1.00[ASN][1000 genomes]
rs12047120	1.00[ASN][1000 genomes]
rs17855317	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2067635	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3795318	1.00[ASN][1000 genomes]
rs4256763	1.00[ASN][1000 genomes]
rs4300171	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4364819	1.00[ASN][1000 genomes]
rs4382655	1.00[ASN][1000 genomes]
rs4388641	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4660330	1.00[ASN][1000 genomes]
rs4660333	1.00[ASN][1000 genomes]
rs4660901	1.00[ASN][1000 genomes]
rs4660909	1.00[ASN][1000 genomes]
rs55641506	0.86[AFR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55652826	1.00[ASN][1000 genomes]
rs55735913	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55765474	1.00[ASN][1000 genomes]
rs56047133	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56140667	1.00[ASN][1000 genomes]
rs56278140	1.00[ASN][1000 genomes]
rs56295206	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56301932	1.00[ASN][1000 genomes]
rs56368769	1.00[ASN][1000 genomes]
rs6429590	1.00[ASN][1000 genomes]
rs6429592	1.00[ASN][1000 genomes]
rs6429593	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6669534	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6685465	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6687316	0.86[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6689417	1.00[ASN][1000 genomes]
rs6693222	1.00[ASN][1000 genomes]
rs6696284	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6700322	1.00[ASN][1000 genomes]
rs6700974	1.00[ASN][1000 genomes]
rs72677518	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677530	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677533	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677541	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677543	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677545	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677546	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677550	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677553	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72677556	1.00[ASN][1000 genomes]
rs72677559	1.00[ASN][1000 genomes]
rs72690901	1.00[ASN][1000 genomes]
rs72692603	1.00[ASN][1000 genomes]
rs72692613	1.00[ASN][1000 genomes]
rs72692632	1.00[ASN][1000 genomes]
rs72692639	1.00[ASN][1000 genomes]
rs7530480	1.00[ASN][1000 genomes]
rs7532388	1.00[ASN][1000 genomes]
rs7533750	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7548617	1.00[ASN][1000 genomes]
rs7552810	1.00[ASN][1000 genomes]
rs7555458	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs884443	1.00[ASN][1000 genomes]
rs9429090	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9429091	0.85[EUR][1000 genomes]
rs9429093	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9429179	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9429184	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9429187	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9429188	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932680	chr1:45935520-46686477	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	232 gene(s)	inside rSNPs	diseases
2	nsv868828	chr1:45953923-46686477	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	232 gene(s)	inside rSNPs	diseases
3	nsv871928	chr1:46024701-46609736	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	123 gene(s)	inside rSNPs	diseases
4	nsv1003517	chr1:46244432-46609881	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
5	nsv1005189	chr1:46335186-46949309	Bivalent/Poised TSS Weak transcription Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
6	nsv534946	chr1:46335186-46949309	ZNF genes & repeats Strong transcription Flanking Active TSS Weak transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
7	esv2761743	chr1:46339858-47026743	Active TSS Weak transcription Bivalent Enhancer Enhancers Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
8	esv2754420	chr1:46461580-46635180	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
9	nsv1006747	chr1:46476089-46655484	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
10	nsv534947	chr1:46476089-46655484	Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
11	nsv1012418	chr1:46544842-46619890	Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
12	nsv534948	chr1:46544842-46619890	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
13	nsv1006530	chr1:46544842-46655484	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
14	nsv534949	chr1:46544842-46655484	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

mRNA abundance (count:14)

SNP	Gene	Cis/trans	Tissue	Source
rs1355641	CCDC163P	cis	Thyroid	GTEx
rs1355641	CCDC163P	cis	Whole Blood	GTEx
rs1355641	CCDC163P	cis	Esophagus Muscularis	GTEx
rs1355641	CCDC163P	cis	Adipose Subcutaneous	GTEx
rs1355641	CCDC163P	cis	Artery Aorta	GTEx
rs1355641	NSUN4	Cis_1M	lymphoblastoid	RTeQTL
rs1355641	CCDC163P	cis	Stomach	GTEx
rs1355641	CCDC163P	cis	Esophagus Mucosa	GTEx
rs1355641	CCDC163P	cis	lung	GTEx
rs1355641	CCDC163P	cis	Heart Left Ventricle	GTEx
rs1355641	CCDC163P	cis	Nerve Tibial	GTEx
rs1355641	CCDC163P	cis	Skin Sun Exposed Lower leg	GTEx
rs1355641	CCDC163P	cis	Artery Tibial	GTEx
rs1355641	CCDC163P	cis	Muscle Skeletal	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:46594000-46599200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr1:46594000-46599200	Active TSS	Psoas Muscle	Psoas
3	chr1:46594000-46599400	Active TSS	Left Ventricle	heart
4	chr1:46594600-46599200	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr1:46594600-46599400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr1:46594800-46599200	Active TSS	Duodenum Smooth Muscle	Duodenum
7	chr1:46594800-46599400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr1:46595000-46599200	Active TSS	Cortex derived primary cultured neurospheres	brain
9	chr1:46595200-46599200	Active TSS	Colon Smooth Muscle	Colon
10	chr1:46595200-46599200	Active TSS	Stomach Smooth Muscle	stomach
11	chr1:46595200-46599400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr1:46595200-46599400	Active TSS	Fetal Heart	heart
13	chr1:46595200-46599400	Active TSS	Pancreatic Islets	Pancreatic Islet
14	chr1:46595200-46599600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr1:46595400-46599200	Active TSS	Fetal Brain Male	brain
16	chr1:46595400-46599200	Active TSS	Fetal Lung	lung
17	chr1:46595400-46599200	Active TSS	NH-A	brain
18	chr1:46595400-46599400	Active TSS	Brain Anterior Caudate	brain
19	chr1:46595400-46599600	Active TSS	Fetal Kidney	kidney
20	chr1:46595600-46599200	Active TSS	Brain Hippocampus Middle	brain
21	chr1:46595600-46599200	Active TSS	Brain Inferior Temporal Lobe	brain
22	chr1:46595600-46599200	Active TSS	Fetal Brain Female	brain
23	chr1:46595600-46599200	Active TSS	GM12878-XiMat	blood
24	chr1:46595600-46599200	Active TSS	Hela-S3	cervix
25	chr1:46595600-46599400	Active TSS	Brain Angular Gyrus	brain
26	chr1:46595800-46599200	Active TSS	Fetal Muscle Leg	muscle
27	chr1:46595800-46599200	Active TSS	Fetal Stomach	stomach
28	chr1:46595800-46599200	Active TSS	Ovary	ovary
29	chr1:46595800-46599200	Active TSS	NHLF	lung
30	chr1:46595800-46599400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr1:46595800-46599400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
32	chr1:46595800-46599600	Active TSS	HSMMtube	muscle
33	chr1:46596000-46599200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr1:46596000-46599200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr1:46596000-46599600	Active TSS	Fetal Intestine Large	intestine
36	chr1:46596000-46599600	Active TSS	Fetal Muscle Trunk	muscle
37	chr1:46596200-46599200	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr1:46596200-46599200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr1:46596200-46599200	Active TSS	Brain Substantia Nigra	brain
40	chr1:46596200-46599200	Active TSS	Rectal Smooth Muscle	rectum
41	chr1:46596200-46599400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr1:46596200-46599600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
43	chr1:46596400-46599200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr1:46596400-46599200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr1:46596400-46599200	Active TSS	Brain Cingulate Gyrus	brain
46	chr1:46596400-46599400	Active TSS	Aorta	Aorta
47	chr1:46596400-46599600	Active TSS	H9 Cell Line	embryonic stem cell
48	chr1:46596600-46599200	Active TSS	Placenta	Placenta
49	chr1:46596600-46599200	Active TSS	A549	lung
50	chr1:46596800-46599200	Active TSS	iPS-18 Cell Line	embryonic stem cell

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