Variant report
| Variant | rs12084999 |
|---|---|
| Chromosome Location | chr1:174875884-174875885 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:174844800-174877400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr1:174856800-174876400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 3 | chr1:174861400-174876200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr1:174861400-174902400 | Weak transcription | Left Ventricle | heart |
| 5 | chr1:174862800-174882400 | Weak transcription | Fetal Lung | lung |
| 6 | chr1:174863200-174883200 | Weak transcription | Small Intestine | intestine |
| 7 | chr1:174863400-174881400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 8 | chr1:174863800-174876000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 9 | chr1:174863800-174883000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 10 | chr1:174864200-174882000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr1:174869600-174877600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 12 | chr1:174870000-174877600 | Weak transcription | Brain Anterior Caudate | brain |
| 13 | chr1:174871800-174878400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 14 | chr1:174871800-174882000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 15 | chr1:174872000-174885800 | Weak transcription | Pancreas | Pancrea |
| 16 | chr1:174872000-174886000 | Weak transcription | Gastric | stomach |
| 17 | chr1:174872000-174889200 | Weak transcription | Primary B cells from cord blood | blood |
| 18 | chr1:174872200-174882600 | Weak transcription | Stomach Mucosa | stomach |
| 19 | chr1:174872400-174888800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 20 | chr1:174872800-174900400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr1:174873200-174876800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 22 | chr1:174873400-174897200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 23 | chr1:174873600-174882000 | Weak transcription | K562 | blood |
| 24 | chr1:174874000-174910000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 25 | chr1:174874200-174885400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 26 | chr1:174874200-174885800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 27 | chr1:174874200-174938200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 28 | chr1:174874800-174882600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 29 | chr1:174875200-174876400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 30 | chr1:174875200-174879200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 31 | chr1:174875400-174885400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 32 | chr1:174875600-174876000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 33 | chr1:174875600-174881000 | Weak transcription | Fetal Intestine Large | intestine |
