The 2.0 version of rSNPBase

Variant report

Variant rs59073370
Chromosome Location chr1:174859654-174859655
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174844800-174871600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:174844800-174874400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:174844800-174877400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:174845000-174862800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:174845000-174863000 Weak transcription Primary T cells from cord blood blood
6 chr1:174845200-174862600 Weak transcription Liver Liver
7 chr1:174846200-174861200 Weak transcription GM12878-XiMat blood
8 chr1:174846600-174862800 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:174846800-174861000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:174846800-174874000 Weak transcription Ovary ovary
11 chr1:174847000-174869200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:174847400-174862800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:174847400-174863000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr1:174847400-174864400 Strong transcription HUES6 Cell Line embryonic stem cell
15 chr1:174847400-174864600 Strong transcription H1 Cell Line embryonic stem cell
16 chr1:174847400-174864600 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr1:174847600-174874400 Weak transcription Esophagus oesophagus
18 chr1:174849200-174864400 Strong transcription iPS-20b Cell Line embryonic stem cell
19 chr1:174849600-174864400 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr1:174850200-174861200 Weak transcription Pancreas Pancrea
21 chr1:174850200-174874800 Weak transcription Fetal Stomach stomach
22 chr1:174850400-174869600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:174852000-174873400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr1:174852800-174860600 Weak transcription Left Ventricle heart
25 chr1:174852800-174864000 Strong transcription iPS-18 Cell Line embryonic stem cell
26 chr1:174852800-174874800 Weak transcription Spleen Spleen
27 chr1:174853400-174865000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr1:174853400-174870200 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr1:174854000-174862800 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr1:174854200-174862800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr1:174855400-174861200 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr1:174855600-174862400 Weak transcription Small Intestine intestine
33 chr1:174855800-174861200 Weak transcription Fetal Intestine Large intestine
34 chr1:174856200-174860800 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr1:174856400-174862600 Weak transcription Duodenum Mucosa Duodenum
36 chr1:174856600-174866600 Weak transcription Primary B cells from cord blood blood
37 chr1:174856800-174876400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr1:174857000-174870800 Weak transcription H9 Cell Line embryonic stem cell
39 chr1:174857000-174871200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:174857800-174867200 Weak transcription Primary B cells from peripheral blood blood
41 chr1:174858000-174871200 Weak transcription Lung lung
42 chr1:174859000-174859800 Enhancers Stomach Mucosa stomach
43 chr1:174859000-174861000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr1:174859000-174868600 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:174859000-174874000 Weak transcription Brain Angular Gyrus brain
46 chr1:174859200-174860200 Enhancers Fetal Heart heart
47 chr1:174859200-174860600 Weak transcription Fetal Intestine Small intestine
48 chr1:174859400-174863000 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr1:174859400-174866600 Weak transcription Gastric stomach
50 chr1:174859600-174867200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015