Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10913152	0.84[EUR][1000 genomes]
rs10913166	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12117377	0.84[EUR][1000 genomes]
rs12731148	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12758275	0.83[EUR][1000 genomes]
rs1393763	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1503116	0.88[ASN][1000 genomes]
rs1858537	0.85[EUR][1000 genomes]
rs191606	0.80[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.84[EUR][1000 genomes]
rs2102479	0.83[EUR][1000 genomes]
rs2175178	0.84[EUR][1000 genomes]
rs2455726	0.88[ASN][1000 genomes]
rs2455730	0.90[EUR][1000 genomes]
rs2455732	0.90[EUR][1000 genomes]
rs2455749	0.86[EUR][1000 genomes]
rs2455751	0.88[ASN][1000 genomes]
rs2455762	0.91[EUR][1000 genomes]
rs2455764	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2504493	0.91[CHB][hapmap];0.91[JPT][hapmap];0.83[ASN][1000 genomes]
rs2504501	0.91[EUR][1000 genomes]
rs34612848	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35907544	0.83[EUR][1000 genomes]
rs3924562	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3962371	0.83[EUR][1000 genomes]
rs4298694	0.84[EUR][1000 genomes]
rs534088	0.82[EUR][1000 genomes]
rs6687280	0.83[EUR][1000 genomes]
rs6700932	0.82[EUR][1000 genomes]
rs679728	0.84[EUR][1000 genomes]
rs704834	0.83[EUR][1000 genomes]
rs71645275	0.83[EUR][1000 genomes]
rs7535769	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831970	chr1:176386162-176569207	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1004658	chr1:176412174-176460420	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:176415800-176417200	Weak transcription	Placenta	Placenta

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