Variant report

Variant rs12125446
Chromosome Location chr1:145028797-145028798
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145015400-145030000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:145016800-145032600 Weak transcription Liver Liver
3 chr1:145016800-145032800 Weak transcription Spleen Spleen
4 chr1:145023800-145032000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:145023800-145032800 Weak transcription Fetal Muscle Trunk muscle
6 chr1:145023800-145034000 Weak transcription Pancreas Pancrea
7 chr1:145024600-145028800 Weak transcription Right Ventricle heart
8 chr1:145025400-145030200 Weak transcription Adipose Nuclei Adipose
9 chr1:145026200-145030000 Enhancers Fetal Brain Male brain
10 chr1:145026400-145030400 Strong transcription Fetal Muscle Leg muscle
11 chr1:145026600-145028800 Weak transcription Placenta Placenta
12 chr1:145026800-145030200 Genic enhancers Psoas Muscle Psoas
13 chr1:145027000-145029600 Enhancers K562 blood
14 chr1:145027200-145029400 Flanking Active TSS Brain Germinal Matrix brain
15 chr1:145027200-145030000 Genic enhancers Skeletal Muscle Female skeletal muscle
16 chr1:145027400-145029000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:145027400-145029000 Enhancers Duodenum Smooth Muscle Duodenum
18 chr1:145027600-145028800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:145027600-145029400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
20 chr1:145027600-145030400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:145027600-145037200 Genic enhancers HSMM muscle
22 chr1:145027800-145028800 Flanking Active TSS Brain Cingulate Gyrus brain
23 chr1:145027800-145029000 Enhancers HUES48 Cell Line embryonic stem cell
24 chr1:145027800-145029000 Flanking Active TSS Brain Substantia Nigra brain
25 chr1:145027800-145029200 Flanking Active TSS Brain Inferior Temporal Lobe brain
26 chr1:145027800-145029400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:145027800-145029400 Enhancers HMEC breast
28 chr1:145027800-145029400 Genic enhancers NHDF-Ad bronchial
29 chr1:145027800-145030200 Genic enhancers Skeletal Muscle Male skeletal muscle
30 chr1:145027800-145030200 Genic enhancers HSMMtube muscle
31 chr1:145027800-145030400 Genic enhancers Aorta Aorta
32 chr1:145028000-145028800 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr1:145028000-145028800 Flanking Active TSS Brain Hippocampus Middle brain
34 chr1:145028000-145028800 Enhancers Fetal Stomach stomach
35 chr1:145028000-145028800 Enhancers NHLF lung
36 chr1:145028000-145029000 Enhancers H1 Cell Line embryonic stem cell
37 chr1:145028000-145029000 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr1:145028000-145029000 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr1:145028000-145029000 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr1:145028000-145029000 Genic enhancers Left Ventricle heart
41 chr1:145028000-145029000 Flanking Active TSS Stomach Smooth Muscle stomach
42 chr1:145028000-145029200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:145028000-145029400 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:145028000-145029400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
45 chr1:145028000-145030400 Genic enhancers Osteobl bone
46 chr1:145028000-145031200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:145028000-145031200 Genic enhancers Muscle Satellite Cultured Cells --
48 chr1:145028200-145029000 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr1:145028200-145029000 Flanking Active TSS Brain Anterior Caudate brain
50 chr1:145028200-145029400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links