Variant report

Variant rs6674788
Chromosome Location chr1:144929327-144929328
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144922200-144929400 Weak transcription A549 lung
2 chr1:144922200-144930600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:144922200-144930600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:144922200-144930600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:144922600-144929600 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:144923800-144930400 Weak transcription Esophagus oesophagus
7 chr1:144923800-144930600 Weak transcription Spleen Spleen
8 chr1:144924200-144930400 Weak transcription Fetal Muscle Trunk muscle
9 chr1:144925000-144930200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:144925000-144930600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:144925200-144929400 Enhancers Stomach Mucosa stomach
12 chr1:144925200-144932000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:144925400-144930000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:144925600-144929600 Weak transcription Placenta Placenta
15 chr1:144925800-144931000 Flanking Active TSS Dnd41 blood
16 chr1:144925800-144931600 Flanking Active TSS Duodenum Mucosa Duodenum
17 chr1:144925800-144931800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
18 chr1:144925800-144931800 Flanking Active TSS Adipose Nuclei Adipose
19 chr1:144926000-144930200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:144926000-144930400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
21 chr1:144926000-144930400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
22 chr1:144926000-144930600 Enhancers Hela-S3 cervix
23 chr1:144926000-144931400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
24 chr1:144926000-144931400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
25 chr1:144926000-144931400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:144926000-144931600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
27 chr1:144926000-144931600 Flanking Active TSS Liver Liver
28 chr1:144926200-144930400 Weak transcription Pancreas Pancrea
29 chr1:144926200-144930600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:144926200-144930600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:144926200-144931600 Flanking Active TSS Brain Hippocampus Middle brain
32 chr1:144926200-144931600 Flanking Active TSS NH-A brain
33 chr1:144926400-144929800 Flanking Active TSS Fetal Kidney kidney
34 chr1:144926400-144930400 Weak transcription Lung lung
35 chr1:144926800-144929400 Flanking Active TSS NHDF-Ad bronchial
36 chr1:144926800-144930600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:144926800-144932000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:144927000-144929400 Flanking Active TSS Fetal Intestine Large intestine
39 chr1:144927000-144930600 Enhancers Primary monocytes fromperipheralblood blood
40 chr1:144927000-144931400 Flanking Active TSS HUVEC blood vessel
41 chr1:144927000-144931600 Strong transcription K562 blood
42 chr1:144927000-144932600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:144927200-144929400 Active TSS Fetal Brain Male brain
44 chr1:144927200-144929800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
45 chr1:144927200-144929800 Transcr. at gene 5' and 3' HSMM muscle
46 chr1:144927200-144930400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:144927200-144931200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
48 chr1:144927200-144931600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:144927200-144931600 Flanking Active TSS GM12878-XiMat blood
50 chr1:144927200-144931800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived

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