Variant report

Variant rs12131174
Chromosome Location chr1:145030649-145030650
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145016800-145032600 Weak transcription Liver Liver
2 chr1:145016800-145032800 Weak transcription Spleen Spleen
3 chr1:145023800-145032000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:145023800-145032800 Weak transcription Fetal Muscle Trunk muscle
5 chr1:145023800-145034000 Weak transcription Pancreas Pancrea
6 chr1:145027600-145037200 Genic enhancers HSMM muscle
7 chr1:145028000-145031200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:145028000-145031200 Genic enhancers Muscle Satellite Cultured Cells --
9 chr1:145028400-145033600 Enhancers Pancreatic Islets Pancreatic Islet
10 chr1:145028600-145038000 Enhancers Brain Angular Gyrus brain
11 chr1:145028800-145031000 Enhancers Brain Hippocampus Middle brain
12 chr1:145028800-145031400 Enhancers Placenta Placenta
13 chr1:145028800-145032600 Weak transcription Fetal Stomach stomach
14 chr1:145028800-145033200 Enhancers Right Ventricle heart
15 chr1:145029000-145030800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:145029000-145030800 Enhancers Primary hematopoietic stem cells blood
17 chr1:145029000-145031000 Enhancers Fetal Brain Female brain
18 chr1:145029000-145031400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:145029000-145031600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:145029000-145032000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:145029000-145032000 Weak transcription Stomach Smooth Muscle stomach
22 chr1:145029000-145032000 Weak transcription NH-A brain
23 chr1:145029000-145032200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:145029000-145032200 Weak transcription Rectal Smooth Muscle rectum
25 chr1:145029000-145034200 Enhancers Brain Substantia Nigra brain
26 chr1:145029200-145031000 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr1:145029200-145035400 Enhancers Brain Inferior Temporal Lobe brain
28 chr1:145029400-145030800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:145029400-145031800 Weak transcription HMEC breast
30 chr1:145029400-145032000 Weak transcription NHDF-Ad bronchial
31 chr1:145029600-145030800 Enhancers Primary monocytes fromperipheralblood blood
32 chr1:145029600-145030800 Flanking Active TSS K562 blood
33 chr1:145030000-145030800 Flanking Active TSS Brain Anterior Caudate brain
34 chr1:145030000-145031000 Bivalent Enhancer NHEK skin
35 chr1:145030200-145031000 Enhancers Adipose Nuclei Adipose
36 chr1:145030200-145031000 Transcr. at gene 5' and 3' HSMMtube muscle
37 chr1:145030200-145031200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
38 chr1:145030200-145031400 Enhancers Psoas Muscle Psoas
39 chr1:145030200-145031600 Enhancers Fetal Brain Male brain
40 chr1:145030200-145031600 Flanking Active TSS Fetal Heart heart
41 chr1:145030200-145032800 Enhancers Brain Cingulate Gyrus brain
42 chr1:145030200-145038200 Weak transcription H9 Cell Line embryonic stem cell
43 chr1:145030400-145031000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:145030400-145031000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:145030400-145031000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:145030400-145031000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:145030400-145031000 Enhancers Aorta Aorta
48 chr1:145030400-145031000 Enhancers Small Intestine intestine
49 chr1:145030400-145031000 Enhancers Monocytes-CD14+_RO01746 blood
50 chr1:145030400-145031200 Genic enhancers Brain Germinal Matrix brain

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