Variant report

Variant rs2312022
Chromosome Location chr1:144930351-144930352
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144922200-144930600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:144922200-144930600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:144922200-144930600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:144923800-144930400 Weak transcription Esophagus oesophagus
5 chr1:144923800-144930600 Weak transcription Spleen Spleen
6 chr1:144924200-144930400 Weak transcription Fetal Muscle Trunk muscle
7 chr1:144925000-144930600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:144925200-144932000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:144925800-144931000 Flanking Active TSS Dnd41 blood
10 chr1:144925800-144931600 Flanking Active TSS Duodenum Mucosa Duodenum
11 chr1:144925800-144931800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
12 chr1:144925800-144931800 Flanking Active TSS Adipose Nuclei Adipose
13 chr1:144926000-144930400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
14 chr1:144926000-144930400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
15 chr1:144926000-144930600 Enhancers Hela-S3 cervix
16 chr1:144926000-144931400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
17 chr1:144926000-144931400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
18 chr1:144926000-144931400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:144926000-144931600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
20 chr1:144926000-144931600 Flanking Active TSS Liver Liver
21 chr1:144926200-144930400 Weak transcription Pancreas Pancrea
22 chr1:144926200-144930600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:144926200-144930600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:144926200-144931600 Flanking Active TSS Brain Hippocampus Middle brain
25 chr1:144926200-144931600 Flanking Active TSS NH-A brain
26 chr1:144926400-144930400 Weak transcription Lung lung
27 chr1:144926800-144930600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:144926800-144932000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:144927000-144930600 Enhancers Primary monocytes fromperipheralblood blood
30 chr1:144927000-144931400 Flanking Active TSS HUVEC blood vessel
31 chr1:144927000-144931600 Strong transcription K562 blood
32 chr1:144927000-144932600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:144927200-144930400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:144927200-144931200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
35 chr1:144927200-144931600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:144927200-144931600 Flanking Active TSS GM12878-XiMat blood
37 chr1:144927200-144931800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:144927400-144930400 Enhancers Primary B cells from peripheral blood blood
39 chr1:144927400-144930600 Enhancers Placenta Amnion Placenta Amnion
40 chr1:144927400-144931800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
41 chr1:144927600-144930400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:144927600-144931800 Flanking Active TSS Primary hematopoietic stem cells blood
43 chr1:144927800-144930600 Active TSS Ovary ovary
44 chr1:144927800-144931600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:144928000-144930400 Active TSS Fetal Muscle Leg muscle
46 chr1:144928000-144930400 Weak transcription Gastric stomach
47 chr1:144928000-144930400 Active TSS Right Atrium heart
48 chr1:144928000-144930400 Genic enhancers Skeletal Muscle Female skeletal muscle
49 chr1:144928000-144930400 Active TSS Stomach Smooth Muscle stomach
50 chr1:144928000-144931800 Flanking Active TSS Primary T cells from cord blood blood

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