The 2.0 version of rSNPBase

Variant report

Variant rs12126820
Chromosome Location chr1:214702497-214702498
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214665400-214705400 Weak transcription Right Ventricle heart
2 chr1:214688400-214706200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:214688400-214710600 Weak transcription Spleen Spleen
4 chr1:214690600-214705600 Weak transcription Ovary ovary
5 chr1:214690600-214705600 Weak transcription Pancreas Pancrea
6 chr1:214691400-214705600 Weak transcription Placenta Placenta
7 chr1:214692400-214710600 Weak transcription HUVEC blood vessel
8 chr1:214694400-214706400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:214694600-214705400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:214697800-214706000 Weak transcription Lung lung
11 chr1:214698000-214704800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr1:214698800-214710800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:214699000-214705400 Weak transcription Fetal Intestine Small intestine
14 chr1:214699200-214702600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:214699200-214702600 Enhancers Osteobl bone
16 chr1:214699200-214704600 Weak transcription Rectal Smooth Muscle rectum
17 chr1:214699200-214705600 Weak transcription Gastric stomach
18 chr1:214699200-214706200 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:214699200-214706200 Weak transcription Esophagus oesophagus
20 chr1:214699200-214711400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:214699200-214711600 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:214699400-214702600 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr1:214699400-214704600 Weak transcription Fetal Kidney kidney
26 chr1:214699400-214704800 Weak transcription Fetal Muscle Leg muscle
27 chr1:214699400-214705400 Weak transcription Fetal Stomach stomach
28 chr1:214699400-214706000 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:214699600-214702600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:214699600-214704800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:214699600-214705400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:214699600-214705400 Weak transcription Fetal Muscle Trunk muscle
33 chr1:214699800-214715200 Weak transcription Stomach Mucosa stomach
34 chr1:214700000-214704600 Weak transcription Colon Smooth Muscle Colon
35 chr1:214700000-214704600 Weak transcription HSMM muscle
36 chr1:214700000-214704800 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:214700000-214705400 Weak transcription NHLF lung
38 chr1:214700000-214706000 Weak transcription Stomach Smooth Muscle stomach
39 chr1:214700200-214702600 Weak transcription HMEC breast
40 chr1:214700200-214704000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:214700600-214705400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:214700800-214702600 Weak transcription Psoas Muscle Psoas
43 chr1:214700800-214702600 Weak transcription NHEK skin
44 chr1:214700800-214704600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr1:214700800-214706400 Weak transcription Left Ventricle heart
46 chr1:214700800-214711400 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr1:214701200-214704600 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr1:214701200-214705200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:214701200-214705400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:214701200-214705600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015