Variant report

Variant	rs73079704
Chromosome Location	chr1:214699790-214699791
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:214697599..214700656-chr1:214706044..214709050,3	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs11120345	1.00[EUR][1000 genomes]
rs11120346	1.00[EUR][1000 genomes]
rs11120347	1.00[EUR][1000 genomes]
rs11120348	1.00[EUR][1000 genomes]
rs11810525	1.00[EUR][1000 genomes]
rs12119039	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12121515	1.00[EUR][1000 genomes]
rs12124603	1.00[EUR][1000 genomes]
rs12125611	1.00[EUR][1000 genomes]
rs12126820	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12127207	1.00[EUR][1000 genomes]
rs12127340	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12127827	1.00[EUR][1000 genomes]
rs12129205	1.00[AMR][1000 genomes]
rs12129528	0.90[EUR][1000 genomes]
rs12135749	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12136877	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12142620	1.00[EUR][1000 genomes]
rs17023126	1.00[EUR][1000 genomes]
rs56662203	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57108161	1.00[EUR][1000 genomes]
rs59160493	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60226530	1.00[EUR][1000 genomes]
rs60961360	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6690349	1.00[EUR][1000 genomes]
rs73077971	1.00[EUR][1000 genomes]
rs73077984	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73077989	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73077995	1.00[EUR][1000 genomes]
rs73079729	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73079746	1.00[EUR][1000 genomes]
rs73079748	1.00[EUR][1000 genomes]
rs73079754	0.82[EUR][1000 genomes]
rs73079755	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73079759	0.82[EUR][1000 genomes]
rs73079763	0.82[EUR][1000 genomes]
rs73079764	0.82[EUR][1000 genomes]
rs73079768	0.82[EUR][1000 genomes]
rs7539678	1.00[EUR][1000 genomes]

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214665400-214705400	Weak transcription	Right Ventricle	heart
2	chr1:214669800-214700400	Weak transcription	Aorta	Aorta
3	chr1:214688400-214706200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr1:214688400-214710600	Weak transcription	Spleen	Spleen
5	chr1:214690600-214705600	Weak transcription	Ovary	ovary
6	chr1:214690600-214705600	Weak transcription	Pancreas	Pancrea
7	chr1:214691400-214705600	Weak transcription	Placenta	Placenta
8	chr1:214692400-214710600	Weak transcription	HUVEC	blood vessel
9	chr1:214693000-214701000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr1:214694400-214706400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr1:214694600-214705400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr1:214696200-214701000	Weak transcription	Fetal Heart	heart
13	chr1:214696400-214700800	Enhancers	Psoas Muscle	Psoas
14	chr1:214697000-214701200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr1:214697200-214700000	Weak transcription	Left Ventricle	heart
16	chr1:214697200-214701400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr1:214697400-214702400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr1:214697600-214700000	Enhancers	Muscle Satellite Cultured Cells	--
19	chr1:214697600-214701200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr1:214697600-214701200	Enhancers	NH-A	brain
21	chr1:214697800-214700000	Enhancers	Hela-S3	cervix
22	chr1:214697800-214701400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr1:214697800-214706000	Weak transcription	Lung	lung
24	chr1:214698000-214700600	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr1:214698000-214704800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr1:214698200-214699800	Enhancers	Stomach Mucosa	stomach
27	chr1:214698200-214700000	Enhancers	Colon Smooth Muscle	Colon
28	chr1:214698200-214700000	Enhancers	HSMM	muscle
29	chr1:214698200-214700000	Enhancers	NHLF	lung
30	chr1:214698200-214700200	Enhancers	HMEC	breast
31	chr1:214698400-214699800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr1:214698400-214700000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr1:214698400-214700200	Enhancers	A549	lung
34	chr1:214698400-214700800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
35	chr1:214698400-214701400	Enhancers	NHDF-Ad	bronchial
36	chr1:214698600-214700000	Enhancers	Stomach Smooth Muscle	stomach
37	chr1:214698600-214700200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr1:214698800-214701200	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr1:214698800-214710800	Weak transcription	Duodenum Smooth Muscle	Duodenum
40	chr1:214699000-214701000	Weak transcription	Fetal Lung	lung
41	chr1:214699000-214705400	Weak transcription	Fetal Intestine Small	intestine
42	chr1:214699200-214700400	Weak transcription	HUES6 Cell Line	embryonic stem cell
43	chr1:214699200-214700400	Weak transcription	HUES64 Cell Line	embryonic stem cell
44	chr1:214699200-214700800	Enhancers	Skeletal Muscle Male	skeletal muscle
45	chr1:214699200-214700800	Enhancers	NHEK	skin
46	chr1:214699200-214701000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr1:214699200-214701200	Enhancers	Skeletal Muscle Female	skeletal muscle
48	chr1:214699200-214702400	Weak transcription	Primary T cells from cord blood	blood
49	chr1:214699200-214702600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
50	chr1:214699200-214702600	Enhancers	Osteobl	bone

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