Variant report

Variant	rs73079754
Chromosome Location	chr1:214713958-214713959
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:214712875..214714505-chr1:214717917..214719461,2	K562	blood:

rs_ID	r²[population]
rs11120345	0.82[EUR][1000 genomes]
rs11120346	0.82[EUR][1000 genomes]
rs11120347	0.82[EUR][1000 genomes]
rs11120348	0.82[EUR][1000 genomes]
rs11810525	0.82[EUR][1000 genomes]
rs12119039	0.82[EUR][1000 genomes]
rs12121515	0.82[EUR][1000 genomes]
rs12124603	0.82[EUR][1000 genomes]
rs12125611	0.82[EUR][1000 genomes]
rs12126820	0.82[EUR][1000 genomes]
rs12127207	0.82[EUR][1000 genomes]
rs12127340	0.82[EUR][1000 genomes]
rs12127827	0.82[EUR][1000 genomes]
rs12135749	0.82[EUR][1000 genomes]
rs12136877	0.82[EUR][1000 genomes]
rs12142620	0.82[EUR][1000 genomes]
rs17023126	0.82[EUR][1000 genomes]
rs56662203	0.82[EUR][1000 genomes]
rs57108161	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs59160493	0.82[EUR][1000 genomes]
rs60226530	0.82[EUR][1000 genomes]
rs60961360	0.82[EUR][1000 genomes]
rs6690349	0.82[EUR][1000 genomes]
rs73077971	0.82[EUR][1000 genomes]
rs73077984	0.82[EUR][1000 genomes]
rs73077989	0.82[EUR][1000 genomes]
rs73077995	0.82[EUR][1000 genomes]
rs73079704	0.82[EUR][1000 genomes]
rs73079729	0.82[EUR][1000 genomes]
rs73079746	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73079748	0.82[EUR][1000 genomes]
rs73079755	1.00[EUR][1000 genomes]
rs73079759	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73079763	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73079764	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73079768	1.00[EUR][1000 genomes]
rs7539678	0.82[EUR][1000 genomes]

Chromatin state (count:75 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214699200-214722000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr1:214699200-214722400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr1:214699800-214715200	Weak transcription	Stomach Mucosa	stomach
4	chr1:214701200-214719000	Weak transcription	Hela-S3	cervix
5	chr1:214702800-214718800	Weak transcription	Aorta	Aorta
6	chr1:214706600-214714600	Weak transcription	Lung	lung
7	chr1:214706600-214715600	Weak transcription	Esophagus	oesophagus
8	chr1:214706600-214715600	Weak transcription	Fetal Muscle Trunk	muscle
9	chr1:214706600-214715600	Weak transcription	Fetal Muscle Leg	muscle
10	chr1:214706600-214715600	Weak transcription	Left Ventricle	heart
11	chr1:214706600-214715600	Weak transcription	Ovary	ovary
12	chr1:214706600-214720000	Weak transcription	Fetal Intestine Small	intestine
13	chr1:214706600-214720600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr1:214706800-214714600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr1:214706800-214715600	Weak transcription	Gastric	stomach
16	chr1:214706800-214715600	Weak transcription	Pancreas	Pancrea
17	chr1:214707000-214718200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr1:214710400-214716800	Enhancers	Skeletal Muscle Male	skeletal muscle
19	chr1:214710600-214714000	Enhancers	Fetal Heart	heart
20	chr1:214710600-214714200	Enhancers	NHDF-Ad	bronchial
21	chr1:214710800-214714200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr1:214710800-214714200	Enhancers	Duodenum Smooth Muscle	Duodenum
23	chr1:214710800-214718600	Weak transcription	Right Atrium	heart
24	chr1:214711000-214714000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr1:214711000-214715600	Weak transcription	Spleen	Spleen
26	chr1:214711400-214714800	Enhancers	HSMM	muscle
27	chr1:214711400-214714800	Enhancers	Osteobl	bone
28	chr1:214711600-214714800	Enhancers	NHEK	skin
29	chr1:214711600-214716000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr1:214711800-214716600	Enhancers	Colon Smooth Muscle	Colon
31	chr1:214711800-214719400	Weak transcription	A549	lung
32	chr1:214712000-214719800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr1:214712000-214721200	Weak transcription	HSMMtube	muscle
34	chr1:214712200-214714800	Weak transcription	Fetal Stomach	stomach
35	chr1:214712200-214715600	Weak transcription	Adipose Nuclei	Adipose
36	chr1:214712200-214719800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr1:214712600-214714400	Enhancers	Muscle Satellite Cultured Cells	--
38	chr1:214712800-214714000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr1:214712800-214714000	Enhancers	HMEC	breast
40	chr1:214712800-214714200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr1:214712800-214714800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr1:214713000-214714000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr1:214713000-214714200	Enhancers	Fetal Kidney	kidney
44	chr1:214713000-214714400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr1:214713000-214714800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr1:214713000-214715000	Enhancers	Stomach Smooth Muscle	stomach
47	chr1:214713000-214715600	Enhancers	Skeletal Muscle Female	skeletal muscle
48	chr1:214713000-214716000	Enhancers	ES-I3 Cell Line	embryonic stem cell
49	chr1:214713000-214716200	Enhancers	HUVEC	blood vessel
50	chr1:214713200-214715000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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