Variant report

Variant	rs12146379
Chromosome Location	chr10:18523028-18523029
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:18505438..18506646-chr10:18522365..18523085,3	MCF-7	breast:
2	chr10:18505821..18506646-chr10:18522405..18523085,2	MCF-7	breast:
3	chr10:17649518..17650168-chr10:18522404..18523207,3	MCF-7	breast:

rs_ID	r²[population]
rs10508559	1.00[CEU][hapmap]
rs10828308	1.00[CEU][hapmap]
rs10828310	1.00[CEU][hapmap]
rs11012974	1.00[CEU][hapmap]
rs11013004	1.00[CEU][hapmap]
rs11013005	1.00[CEU][hapmap]
rs11013023	1.00[CEU][hapmap]
rs11013024	1.00[CEU][hapmap]
rs11013037	1.00[CEU][hapmap]
rs11013081	1.00[CEU][hapmap]
rs11013089	1.00[CEU][hapmap]
rs11013119	1.00[CEU][hapmap]
rs11013134	1.00[CEU][hapmap]
rs12354884	1.00[CEU][hapmap]
rs12355606	1.00[CEU][hapmap]
rs12359226	1.00[CEU][hapmap]
rs12359899	1.00[CEU][hapmap]
rs16917080	1.00[CEU][hapmap]
rs17680760	1.00[CEU][hapmap]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18514400-18524400	Weak transcription	Stomach Smooth Muscle	stomach
2	chr10:18514400-18525600	Weak transcription	Fetal Lung	lung
3	chr10:18514400-18526600	Weak transcription	Rectal Smooth Muscle	rectum
4	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:18516800-18524800	Weak transcription	Fetal Stomach	stomach
6	chr10:18520800-18525600	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr10:18521800-18523400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr10:18522000-18523600	Enhancers	Ovary	ovary
9	chr10:18522200-18523600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr10:18522400-18523200	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr10:18522400-18523200	Enhancers	Fetal Heart	heart
12	chr10:18522400-18523600	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr10:18522600-18523200	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr10:18522600-18523200	Enhancers	Colon Smooth Muscle	Colon
15	chr10:18522600-18523200	Enhancers	Left Ventricle	heart
16	chr10:18522600-18523400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr10:18522600-18523400	Enhancers	HUES64 Cell Line	embryonic stem cell
18	chr10:18522600-18523400	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
19	chr10:18522800-18523200	Enhancers	H1 Cell Line	embryonic stem cell
20	chr10:18522800-18523200	Bivalent Enhancer	Liver	Liver
21	chr10:18522800-18523200	Enhancers	Esophagus	oesophagus
22	chr10:18523000-18523200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
23	chr10:18523000-18523400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr10:18523000-18523400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
25	chr10:18523000-18549400	Weak transcription	Pancreas	Pancrea

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