Variant report

Variant	rs11013119
Chromosome Location	chr10:18526850-18526851
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:18523555..18525197-chr10:18525609..18527238,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10508559	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10828308	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10828310	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10828321	1.00[EUR][1000 genomes]
rs10828326	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11012974	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11013004	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11013005	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11013023	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11013024	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11013037	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11013073	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11013076	1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11013081	1.00[CEU][hapmap];0.85[JPT][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11013089	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11013134	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11013147	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12146379	1.00[CEU][hapmap]
rs12218657	1.00[EUR][1000 genomes]
rs12219357	1.00[EUR][1000 genomes]
rs12354884	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12355606	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs12358313	1.00[EUR][1000 genomes]
rs12359226	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12359455	1.00[EUR][1000 genomes]
rs12359899	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs16917080	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17680760	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr10:18523000-18549400	Weak transcription	Pancreas	Pancrea
3	chr10:18523200-18529600	Weak transcription	Esophagus	oesophagus
4	chr10:18523200-18529600	Weak transcription	Left Ventricle	heart
5	chr10:18523200-18536000	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr10:18523400-18529200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr10:18524400-18527200	Enhancers	Colon Smooth Muscle	Colon
8	chr10:18525600-18527400	Enhancers	Ovary	ovary
9	chr10:18526000-18532200	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr10:18526200-18527400	Weak transcription	Fetal Heart	heart
11	chr10:18526200-18528000	Enhancers	Fetal Lung	lung
12	chr10:18526200-18536000	Weak transcription	Right Atrium	heart
13	chr10:18526400-18527000	Enhancers	Stomach Smooth Muscle	stomach
14	chr10:18526600-18528400	Enhancers	Aorta	Aorta
15	chr10:18526800-18527000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr10:18526800-18527200	Weak transcription	Rectal Smooth Muscle	rectum
17	chr10:18526800-18527600	Enhancers	Duodenum Smooth Muscle	Duodenum

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