The 2.0 version of rSNPBase

Variant report

Variant rs12198862
Chromosome Location chr6:131321268-131321269
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131312600-131321800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr6:131314800-131322200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr6:131314800-131325000 Weak transcription Fetal Muscle Trunk muscle
4 chr6:131315200-131321400 Weak transcription Duodenum Mucosa Duodenum
5 chr6:131315600-131321800 Weak transcription Pancreas Pancrea
6 chr6:131315800-131321400 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr6:131315800-131321800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr6:131315800-131321800 Weak transcription Lung lung
9 chr6:131315800-131323200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr6:131315800-131325800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr6:131316800-131322200 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr6:131317400-131321600 Weak transcription Stomach Mucosa stomach
13 chr6:131317400-131322200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:131317600-131321400 Weak transcription Fetal Intestine Large intestine
15 chr6:131317600-131321800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr6:131317600-131321800 Weak transcription Placenta Placenta
17 chr6:131317600-131322200 Weak transcription HMEC breast
18 chr6:131317600-131322400 Weak transcription Gastric stomach
19 chr6:131317600-131323200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr6:131318000-131321800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:131318200-131322200 Weak transcription NHEK skin
22 chr6:131318400-131321600 Weak transcription Fetal Intestine Small intestine
23 chr6:131318600-131322200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr6:131318800-131321400 Weak transcription NHLF lung
25 chr6:131318800-131321600 Weak transcription Fetal Heart heart
26 chr6:131318800-131321600 Weak transcription Fetal Muscle Leg muscle
27 chr6:131318800-131321800 Weak transcription HSMMtube muscle
28 chr6:131318800-131325800 Weak transcription Fetal Thymus thymus
29 chr6:131318800-131328000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:131318800-131329200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr6:131319000-131321400 Weak transcription H9 Cell Line embryonic stem cell
32 chr6:131319000-131321400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr6:131319000-131321600 Weak transcription Small Intestine intestine
34 chr6:131319000-131321600 Weak transcription HepG2 liver
35 chr6:131319000-131321600 Weak transcription K562 blood
36 chr6:131319000-131321800 Weak transcription H1 Cell Line embryonic stem cell
37 chr6:131319000-131321800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:131319000-131321800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr6:131319000-131321800 Weak transcription Adipose Nuclei Adipose
40 chr6:131319000-131321800 Weak transcription Fetal Stomach stomach
41 chr6:131319000-131321800 Weak transcription Ovary ovary
42 chr6:131319000-131321800 Weak transcription Right Atrium heart
43 chr6:131319000-131322000 Weak transcription Muscle Satellite Cultured Cells --
44 chr6:131319000-131322200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr6:131319000-131322200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr6:131319000-131322200 Enhancers Brain Hippocampus Middle brain
47 chr6:131319000-131322200 Weak transcription HSMM muscle
48 chr6:131319000-131323200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr6:131319000-131323200 Weak transcription Fetal Kidney kidney
50 chr6:131319000-131323200 Weak transcription NH-A brain

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Last update: Aug 31, 2015