The 2.0 version of rSNPBase

Variant report

Variant rs13219477
Chromosome Location chr6:131227688-131227689
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131159000-131229000 Weak transcription Colonic Mucosa Colon
2 chr6:131191000-131234400 Weak transcription Esophagus oesophagus
3 chr6:131191200-131233000 Weak transcription Spleen Spleen
4 chr6:131203600-131234200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr6:131204400-131228600 Weak transcription Stomach Mucosa stomach
6 chr6:131209000-131234000 Weak transcription Fetal Thymus thymus
7 chr6:131209800-131228000 Weak transcription HUVEC blood vessel
8 chr6:131211000-131228400 Weak transcription Small Intestine intestine
9 chr6:131211200-131234000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr6:131211400-131234200 Weak transcription Primary hematopoietic stem cells blood
11 chr6:131213600-131232200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr6:131215000-131228800 Weak transcription Liver Liver
13 chr6:131215200-131234000 Weak transcription Primary T cells from cord blood blood
14 chr6:131215200-131234200 Weak transcription Thymus Thymus
15 chr6:131215400-131238200 Weak transcription Aorta Aorta
16 chr6:131215600-131228600 Weak transcription Fetal Intestine Small intestine
17 chr6:131215600-131233800 Weak transcription Pancreas Pancrea
18 chr6:131215800-131228400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr6:131216600-131233800 Weak transcription Ovary ovary
20 chr6:131216800-131227800 Weak transcription GM12878-XiMat blood
21 chr6:131216800-131230200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr6:131218200-131228600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr6:131220800-131228400 Weak transcription Duodenum Mucosa Duodenum
25 chr6:131220800-131228600 Weak transcription Fetal Intestine Large intestine
26 chr6:131220800-131228800 Weak transcription Brain Angular Gyrus brain
27 chr6:131222200-131229200 Weak transcription Brain Cingulate Gyrus brain
28 chr6:131222200-131229200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr6:131222200-131229200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr6:131222200-131230400 Weak transcription H9 Cell Line embryonic stem cell
31 chr6:131222200-131234000 Weak transcription Primary B cells from peripheral blood blood
32 chr6:131222200-131234200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr6:131222200-131234400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr6:131222200-131236400 Weak transcription Fetal Lung lung
35 chr6:131222200-131248400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr6:131222200-131251800 Weak transcription Primary B cells from cord blood blood
37 chr6:131222400-131228600 Weak transcription HepG2 liver
38 chr6:131222400-131228800 Weak transcription Brain Hippocampus Middle brain
39 chr6:131222400-131229000 Weak transcription Brain Substantia Nigra brain
40 chr6:131222400-131229000 Weak transcription Fetal Muscle Leg muscle
41 chr6:131222400-131229000 Weak transcription Left Ventricle heart
42 chr6:131222400-131229200 Weak transcription Brain Anterior Caudate brain
43 chr6:131222400-131232800 Weak transcription Rectal Smooth Muscle rectum
44 chr6:131222400-131233200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr6:131222400-131233200 Weak transcription HSMMtube muscle
46 chr6:131222400-131233800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr6:131222400-131238200 Weak transcription Dnd41 blood
48 chr6:131222400-131248600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr6:131222600-131241200 Weak transcription A549 lung
50 chr6:131223600-131227800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015