The 2.0 version of rSNPBase

Variant report

Variant rs12210483
Chromosome Location chr6:131158414-131158415
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131132000-131159200 Weak transcription HSMM muscle
2 chr6:131132000-131173800 Weak transcription HSMMtube muscle
3 chr6:131136400-131174400 Weak transcription Left Ventricle heart
4 chr6:131149000-131172600 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr6:131149400-131213200 Weak transcription Pancreas Pancrea
6 chr6:131149600-131160400 Weak transcription Fetal Brain Male brain
7 chr6:131150400-131161400 Weak transcription Duodenum Mucosa Duodenum
8 chr6:131150600-131183400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr6:131151600-131216600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr6:131152400-131159400 Weak transcription Adipose Nuclei Adipose
11 chr6:131152400-131161800 Strong transcription Fetal Intestine Large intestine
12 chr6:131152800-131168000 Weak transcription Fetal Kidney kidney
13 chr6:131153400-131159600 Weak transcription Fetal Stomach stomach
14 chr6:131153600-131162400 Weak transcription Fetal Lung lung
15 chr6:131154000-131173800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr6:131154600-131160800 Weak transcription Fetal Intestine Small intestine
17 chr6:131155000-131160200 Weak transcription Rectal Smooth Muscle rectum
18 chr6:131155000-131174600 Weak transcription Aorta Aorta
19 chr6:131156200-131159800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr6:131156200-131161000 Genic enhancers Liver Liver
21 chr6:131156600-131158600 Enhancers Brain Inferior Temporal Lobe brain
22 chr6:131157200-131159600 Weak transcription NHLF lung
23 chr6:131157400-131160000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr6:131157600-131159600 Weak transcription Dnd41 blood
25 chr6:131157600-131170200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:131157800-131161400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr6:131157800-131162400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr6:131157800-131163400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:131157800-131168200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr6:131157800-131170200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr6:131158000-131159600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:131158000-131160000 Weak transcription Colon Smooth Muscle Colon
33 chr6:131158000-131172200 Weak transcription Brain Anterior Caudate brain
34 chr6:131158200-131158600 Weak transcription Brain Angular Gyrus brain
35 chr6:131158200-131159600 Weak transcription Brain Hippocampus Middle brain
36 chr6:131158200-131160000 Weak transcription Brain Cingulate Gyrus brain
37 chr6:131158200-131160000 Weak transcription Brain Substantia Nigra brain
38 chr6:131158200-131162200 Weak transcription Muscle Satellite Cultured Cells --
39 chr6:131158200-131163000 Strong transcription HepG2 liver
40 chr6:131158200-131173800 Weak transcription NH-A brain
41 chr6:131158200-131179400 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr6:131158200-131190600 Weak transcription Spleen Spleen
43 chr6:131158200-131214400 Weak transcription Lung lung
44 chr6:131158400-131160800 Strong transcription Fetal Muscle Leg muscle
45 chr6:131158400-131163000 Strong transcription Fetal Muscle Trunk muscle
46 chr6:131158400-131168200 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015