Variant report

Variant	rs12265732
Chromosome Location	chr10:94548072-94548073
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12242813	1.00[AMR][1000 genomes]
rs12244912	1.00[AMR][1000 genomes]
rs12250579	1.00[AMR][1000 genomes]
rs12250744	1.00[AMR][1000 genomes]
rs12252880	1.00[AMR][1000 genomes]
rs12258050	1.00[AMR][1000 genomes]
rs12269076	1.00[AMR][1000 genomes]
rs7069481	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7100065	1.00[AMR][1000 genomes]
rs9325463	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94546600-94551200	Enhancers	Primary B cells from peripheral blood	blood
2	chr10:94546800-94551200	Enhancers	Primary B cells from cord blood	blood
3	chr10:94547000-94551400	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr10:94547200-94549200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr10:94547400-94549000	Bivalent Enhancer	GM12878-XiMat	blood
6	chr10:94547400-94549600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr10:94547400-94549600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr10:94547400-94549600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr10:94547400-94549800	Enhancers	H9 Cell Line	embryonic stem cell
10	chr10:94547400-94550000	Enhancers	H1 Cell Line	embryonic stem cell
11	chr10:94547600-94548600	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr10:94547600-94550400	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr10:94547800-94548200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr10:94547800-94548800	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr10:94548000-94548200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr10:94548000-94548400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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