Variant report
| Variant | rs12275697 |
|---|---|
| Chromosome Location | chr11:59354570-59354571 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:59334200-59366200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr11:59334200-59382000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr11:59340800-59378200 | Strong transcription | Fetal Thymus | thymus |
| 4 | chr11:59342000-59379000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 5 | chr11:59342200-59358000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 6 | chr11:59342200-59378200 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 7 | chr11:59343600-59378400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 8 | chr11:59343800-59382000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 9 | chr11:59344000-59360400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr11:59346200-59360400 | Weak transcription | Esophagus | oesophagus |
| 11 | chr11:59346200-59360400 | Weak transcription | Right Ventricle | heart |
| 12 | chr11:59346200-59361000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 13 | chr11:59346600-59360400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 14 | chr11:59347600-59359800 | Weak transcription | Spleen | Spleen |
| 15 | chr11:59348200-59355000 | Weak transcription | Brain Substantia Nigra | brain |
| 16 | chr11:59348400-59354600 | Weak transcription | Ovary | ovary |
| 17 | chr11:59349000-59357600 | Weak transcription | HUVEC | blood vessel |
| 18 | chr11:59349000-59359400 | Weak transcription | Brain Angular Gyrus | brain |
| 19 | chr11:59350000-59360400 | Weak transcription | Gastric | stomach |
| 20 | chr11:59350200-59355800 | Weak transcription | Aorta | Aorta |
| 21 | chr11:59350200-59360800 | Weak transcription | Stomach Mucosa | stomach |
| 22 | chr11:59350200-59361000 | Weak transcription | Psoas Muscle | Psoas |
| 23 | chr11:59350200-59378200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr11:59350400-59360600 | Weak transcription | NHLF | lung |
| 25 | chr11:59351200-59354800 | Strong transcription | Lung | lung |
| 26 | chr11:59351400-59354600 | Strong transcription | Brain Hippocampus Middle | brain |
| 27 | chr11:59351400-59371400 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 28 | chr11:59351600-59357000 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 29 | chr11:59351800-59369000 | Strong transcription | Placenta | Placenta |
| 30 | chr11:59352000-59359600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 31 | chr11:59352000-59360400 | Weak transcription | Pancreas | Pancrea |
| 32 | chr11:59352200-59357400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 33 | chr11:59352200-59357600 | Weak transcription | Fetal Brain Male | brain |
| 34 | chr11:59352200-59371200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 35 | chr11:59352400-59354600 | Weak transcription | HMEC | breast |
| 36 | chr11:59352400-59354800 | Weak transcription | Brain Anterior Caudate | brain |
| 37 | chr11:59352400-59354800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 38 | chr11:59352400-59354800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 39 | chr11:59352400-59355000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 40 | chr11:59352400-59355400 | Weak transcription | HepG2 | liver |
| 41 | chr11:59352400-59356400 | Strong transcription | Primary B cells from peripheral blood | blood |
| 42 | chr11:59352400-59358000 | Weak transcription | HSMMtube | muscle |
| 43 | chr11:59352400-59359400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 44 | chr11:59352400-59359400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 45 | chr11:59352400-59359400 | Weak transcription | Colon Smooth Muscle | Colon |
| 46 | chr11:59352400-59360600 | Weak transcription | Fetal Heart | heart |
| 47 | chr11:59352400-59369200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 48 | chr11:59352400-59378000 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 49 | chr11:59352600-59354600 | Weak transcription | Fetal Brain Female | brain |
| 50 | chr11:59352600-59354600 | Weak transcription | Fetal Intestine Small | intestine |
